Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1930 ATGAATAGAGGAACAATTATTGTAGATGCTATCACCTACATTGAGAAGCTGCAACAGGAAGTCCAGCGTCTCAGCCAAGAGCTTCACCAAATGGAAGCAACTTCCGAGAAAACAGCAGAGGCACAAATAGATGAAATTGATGCTGTGGAGGATATGAAGAATTGGGGGATACAGGCTGAGGTCAGAGTGGCACAGATAGATGAGAATAAACTCTGGATCAAGATCATCATTGAGAAGAAGAGCGGAAGATTCAGCAAATTGATGGAAGTCCTTGATAATTTTGGCATTGAACTCATAGACACCAATCTCACAACCACAAAAGGAGCATTTCTGATTACAAGCTGCATACAGGGCAAGGATGGTGAAAGGCTTGCAATTGATGAAACCAAGAGTTTGTTGCAAGATATTATCAATGACATAGAGAGCAAGTTGGAATAG 438 0.4132 MNRGTIIVDAITYIEKLQQEVQRLSQELHQMEATSEKTAEAQIDEIDAVEDMKNWGIQAEVRVAQIDENKLWIKIIIEKKSGRFSKLMEVLDNFGIELIDTNLTTTKGAFLITSCIQGKDGERLAIDETKSLLQDIINDIESKLE 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1930 145 PANTHER TRANSCRIPTION FACTOR DYT1 1 140 - -
Aed4g1930 145 Coils Coil 7 41 - -
Aed4g1930 145 Gene3D - 1 39 IPR036638 GO:0046983
Aed4g1930 145 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 140 - -
Aed4g1930 145 SUPERFAMILY ACT-like 69 141 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1930 Aed-Chr4 23145989 23146649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1930 1 137 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 38.621 2.68e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1930 - - gmx:100793637 250.366