Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1914 ATGAGGAAGTGCGAGCTCTGTAGCAGTCCCGCAAGGTTGTTCTGTGAATCAGATCAAGCCAGGCTCTGTTGGGAATGCGATGCTAAGGTACACAGTGCAAACTTCATCGTCACCAAACATCCCAGGATTCTTCTCTGCCATGTTTGTCAATCAACAACGGCGTGGCACGGCACAGGACCCAAGTTTGTACCCACCATGTCCGTTTGCAACACCTGTGTTAACAATAACACTGAGACCTGCAGCGAACAACAACAGAATCATGAAGATGACGACGATGACTCAGGGGAGGATCATGTAGAGAACGATGATGATGGTGGTGTGGCCGAAGATGATGAAGAAAATCAAGTGGTTCCATGGAAATCTACACCACCACCTTCAGCTTCCACTTCTTCAAATAGTTCTTCTACCAGAATTGCCCGATCTAGGATATTGCCTAGAATCTTTCTTATGATCCCCTGGCATTAA 465 0.4688 MRKCELCSSPARLFCESDQARLCWECDAKVHSANFIVTKHPRILLCHVCQSTTAWHGTGPKFVPTMSVCNTCVNNNTETCSEQQQNHEDDDDDSGEDHVENDDDGGVAEDDEENQVVPWKSTPPPSASTSSNSSSTRIARSRILPRIFLMIPWH 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1914 154 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
Aed4g1914 154 SMART bboxneu5 1 45 IPR000315 GO:0008270
Aed4g1914 154 MobiDBLite consensus disorder prediction 119 137 - -
Aed4g1914 154 PANTHER B-BOX TYPE ZINC FINGER PROTEIN 1 136 - -
Aed4g1914 154 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Aed4g1914 154 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 136 - -
Aed4g1914 154 MobiDBLite consensus disorder prediction 85 111 - -
Aed4g1914 154 CDD Bbox1_BBX-like 3 45 - -
Aed4g1914 154 MobiDBLite consensus disorder prediction 80 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1914 Aed-Chr4 23046863 23048160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1914 2 106 C2C2-CO-like Transcription Factor Family AT4G27310 46.429 9.03e-31 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed4g1914 zf-B_box 8.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1914 - - gmx:100805832 200.675