Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1911 ATGGAGTTTGATCTGGAAGACCCACCAGTCAGTTTGGAAGAAGAGCAAACCTTTACTATATCAGAACTCTTTGCCTCCGAATCTGAACACGTGCCCTCACCAAACTGCTTAACTTCAACACATTTTCACGTTTTCTGCTGTAAAGCCATATCTCTCATTCTTCAGGTTCAGGTTTCTTGCAAATTGAACCCATTGGTAGCTTATCTTGCTATAAATTACTTGCACCGTTTCATCTCAAGCCAAGAAATTCCGCAGGGGAAGCCGTGGTTTCTCAGGCTTGTTGTCATATCATGTCTTTCTCTTGCTTCGAAGATGAAGAACACAACTTTATCATTTTTGGATATGCAGAAAGAAGGTTGTAACTTTAAGGCTCAAAGTATTCAGAGAATGGAGCTTCTTATTCTCGGGGCTCTGAAATGGCGTATGAGGTCAATTACACCTTTTTCTTTCCTTCATTTCTTTACCTCTTTAGCTGAAATTGAAGACCAAGCACTTAAAGAGAGAGCTTCAGAGATAATCTTCAATGCTCAAAATGACGTTAAGCTTTTAGAGTATAAACCTTCAACTATTGCAGCAACTGCCCTTATCTTTGCATCTCATGAACTATTCCCACAGCAATATTCTACTGTGAGAGCTTCAATTACAGCCTGTGAGTATCTAGATGAGGAGACATTGTCCAAGTGCTTTGGTTTAATGCAAGAGATGATGAGAACGGAAGCAAAGGAGTTAATGATAGATGCAAGCTTTTTAAGCACAGAAACTCCAGTGAGTGTGTTAGAGAGAAACACTAAACGACAAAGAATTTAA 807 0.3941 MEFDLEDPPVSLEEEQTFTISELFASESEHVPSPNCLTSTHFHVFCCKAISLILQVQVSCKLNPLVAYLAINYLHRFISSQEIPQGKPWFLRLVVISCLSLASKMKNTTLSFLDMQKEGCNFKAQSIQRMELLILGALKWRMRSITPFSFLHFFTSLAEIEDQALKERASEIIFNAQNDVKLLEYKPSTIAATALIFASHELFPQQYSTVRASITACEYLDEETLSKCFGLMQEMMRTEAKELMIDASFLSTETPVSVLERNTKRQRI 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1911 268 SUPERFAMILY Cyclin-like 14 142 IPR036915 -
Aed4g1911 268 CDD CYCLIN 49 135 IPR013763 -
Aed4g1911 268 PANTHER CYCLINS 5 266 IPR039361 -
Aed4g1911 268 SUPERFAMILY Cyclin-like 126 242 IPR036915 -
Aed4g1911 268 Pfam Cyclin, C-terminal domain 145 238 IPR004367 -
Aed4g1911 268 Pfam Cyclin, N-terminal domain 23 142 IPR006671 -
Aed4g1911 268 Gene3D - 22 229 - -
Aed4g1911 268 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 5 266 - -
Aed4g1911 268 SMART Cyclin_C_2 145 262 IPR004367 -
Aed4g1911 268 Gene3D - 33 143 - -
Aed4g1911 268 SMART cyclin_7 51 136 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1911 Aed-Chr4 23035707 23037036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1911 1 261 Core Cell Cycle Gene Families AT4G03270 40.569 2.08e-58 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1911 K18812 - gmx:100799985 476.863