Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1895 ATGCAGACGAAGTCGAGCGGCGGCAAGCGTGGCTTAGATTCAGCTTCCGGCGCCGACGAAGATCAACCTGAAAGAAAGCGACCTGCTCTCGCTAGTGTAATTGTTGAAGCCCTCAAGGTGGACAGTCTGCAGAAACTTTGTTCATCACTGGAGCCTATTCTTCGTAGAGTTAATTCAATGTTCTTGCTTCCTGCTCAACAGGTTAGCGAAGAAGTAGAGTGTGCTTTAGCAAAATTAGTCCCTGCCAAGCTTAATGGGAGGCCTTCCCCCAAGAGCATAGAAGGCCCTGATGACAGCAGTTTACAATTACAATTCAGGACCAGGTTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGATGGAGAGCATGGAAGCGCCATACATATTGTTTTGGTTGATACAACAACAGGCCATGTTGTGACATCTGGATCAGCTTCATGTGTCAAACTGGATGTTATTGTACTTGAAGGAGATTTCAATAACGAAGATGATGACAATTGGAGTGAGGAAGATTTCGATAGCCATGTTGTTAAAGAGCGAGAAGGAAAAAGACCTCTTCTGACTGGTGATCTGCAAGTGACACTGAAGGAGGGTGTAGGAACACTGGGTGAGCTTACATTTACAGACAACTCTAGCTGGATAAGGAGTAGGAAGTTCAGACTGGGGCTCAAAGTTTTCACAGGTTCTTATGAGGGAATGCGTATTCGTGAAGCCAAAACAGAGGCTTTCACTGTTAAGGATCACCGTGGAGAATGTAAGTACATAAACTTCGTTGTTTATGTTCTATACAAGCACTACCCACCTGCGTTGAATGATGAGGTCTGGAGACTGGAGAAGATTGGCAAGGATGGTTCCTTTCACAAGAGGCTCAATAAAGCTGGAATATATACCGTTGAAGATGTCGTACGACTTGTGGTCAGAGATCCACAGAGATTGCGGAATATTCTTGGGAGTGGCATGTCAAACAAAATGTGGGATGTTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGTGGAAAACTCTATGTATACTATCCCGATGATGCAAGGACCGTTGGCGTTGTTTTCAATAACATCTATGAGTTGACTGGTTTAATTACCAATGACCAATATTACTCTGCTGATTCTCTCTCCGACAATCAAAAGGTTTACGTGGACACGTTGGTGAAGAAGGCATATGAGAATTGGATGCATGTTATTGAGTATGATGGCAAGTCTCTGCTAAATTACAATCAGAATAGGACTTTGGGCACCTCCCAACCTCTGGCTCCAATGGGTTCCCATGATTATTCAATTTCAAACTCTCTTGATCAGCAGACCTCCATCCCAAGTCTACCAGCTCCAGTAACTACAGGGCAGCCTTCGATGGATCCAGCAGTAACAGTTGGAGGTTATCATAATGAGCCGACTACAAGAGGCTCAATGCAACCACAGAATGACAATCATCATTCTTCTATTCAGTTTGATAACACTGCATTCCCACTGCAAAACCAACTAATGAGTGCTTCACACCAATCTCAATTTCCAAGAAACGAAAATGGGCTAAGTCATGGTGCACGACAATCAGCCACTCCTGGATTTCCGAATGTCAGCATTTCAAGTCCTATTTATAGAGGACTTGAGGACTACTTCCCAGAGGAGGAGATTCGAACAAGAAGTCACGAGATGCTAGAAAATGAAGATATGCAGAATCTGCTCCGTATATTTGATGTGGGAGGAGGACAATCTCATGCTTCCTTTAATACTCAAGAAGATGCATACCCTTATTCGCCGTCGGCAGTGGCGGCTTACATGCCTGCGGCCTCCCTGAGCTGCAACTTAGATGATGAACCAAACCGTTCCTCAGGAAAGGCTGTTGTGGGCTGGCTCAAGCTAAAGGCAGCTTTGAGATGGGGTATTTTTATTCGAAAAAAGGCTGCTGAGAGAAGGGCACAACTTGTTGAGTTGGATGACCCTTAG 1959 0.4472 MQTKSSGGKRGLDSASGADEDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVNSMFLLPAQQVSEEVECALAKLVPAKLNGRPSPKSIEGPDDSSLQLQFRTRLSLPLFTGGKVDGEHGSAIHIVLVDTTTGHVVTSGSASCVKLDVIVLEGDFNNEDDDNWSEEDFDSHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVFTGSYEGMRIREAKTEAFTVKDHRGECKYINFVVYVLYKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIYTVEDVVRLVVRDPQRLRNILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDDARTVGVVFNNIYELTGLITNDQYYSADSLSDNQKVYVDTLVKKAYENWMHVIEYDGKSLLNYNQNRTLGTSQPLAPMGSHDYSISNSLDQQTSIPSLPAPVTTGQPSMDPAVTVGGYHNEPTTRGSMQPQNDNHHSSIQFDNTAFPLQNQLMSASHQSQFPRNENGLSHGARQSATPGFPNVSISSPIYRGLEDYFPEEEIRTRSHEMLENEDMQNLLRIFDVGGGQSHASFNTQEDAYPYSPSAVAAYMPAASLSCNLDDEPNRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDP 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1895 652 Pfam Calmodulin binding protein-like N-terminal domain 101 248 IPR046831 -
Aed4g1895 652 MobiDBLite consensus disorder prediction 507 530 - -
Aed4g1895 652 Pfam Calmodulin binding protein central domain 269 335 IPR046830 -
Aed4g1895 652 PANTHER OS02G0177800 PROTEIN 8 650 IPR012416 GO:0005516
Aed4g1895 652 PANTHER CALMODULIN-BINDING PROTEIN 8 650 - -
Aed4g1895 652 MobiDBLite consensus disorder prediction 1 27 - -
Aed4g1895 652 Pfam Calmodulin binding protein C-terminal domain 340 402 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1895 Aed-Chr4 22936365 22940874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1895 8 647 Calmodulin-binding Proteins AT5G57580 57.681 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1895 - - gmx:100802994 1102.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1954 10 23740677 23745083 Aed4g1895 4 22936365 22940874 PCT