Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1881 ATGGGAACGGAGGTGATGGGGAGGTGGGGCACCTGGGAGGAGCTCCTCCTTGGTGGCGCCGTTCTCCGCCACGGAACCCGGAATTGGAACGTCATCGCCGCCGAGCTCCGGGCACGAACAGTTTGTCCCTACACCATTACTCCCGAGGTCTGTAAAGCCAAATATGAAGACTTGCAACAGCGGTATCCTGGAAACAAGGCTTGGTTTGAGGAGCTTAGAAAGAGCAGAGTAGCAGAGCTGAAGAGAGCTCTGGAGCTGTCTGAAGATTCAATTGGGTCTCTTGAATCTAAGCTTGAAAGCCTCGAGGCTGGAAAGAATGAGAAAAAGATGATTGTGATGTTGATAAAGGATCAGAAATTATTGGAAAGAGCTGAATCTTCCACCAAGACATCAAAGGATGGTCTATCTGCTGGGAGTTTCACACATGAAACCCGGACAAACTGGTCTCCTGAATGTTCTGTTCCAGCTGCATCTGCCGAAGATATGGAGATGAAGCCTGAGGAGACCAAAGTTTTGAACGTCATAGATAAGTTAGCACATACTATATATGAAGGACAAGGAGGAGGAAGTCTTAAGAAGCGGAGAGGGAAGAGGAAGAGGAAGGACTGTGCTTCAGCCTTCCGACGCAGACTTGATAGTCAGAAGAGAGGAAGGTACAAGAAAATGATCCTGCAACACATGGACTTTGACACTATAAGGTCAAGAATTAGCAGCCAGACAATTAAGTCAAGTGTAGAACTTTTCCGGGACTTGCTCCTACTCACTAACAACGCCTTAGTGTTCTACTCCAAGAGCACTCGTGAATACAAAACTGCTCTACTGCTAAGAGGCATTGTGACCAAAAAAATGAGGGAAAGTTTGAAGGGTATGAGCAACAAAACCACCACAGCTCAAGCTAGCAATGTTCCTATCAAAGTACCTGTGCATAATCCTCATGTGAAACCAAGAAGTGTACGGCCAGGCAACAGAAAAATAGTTGCAAAAGCAGTTGGTGGCAACAACTCTGCATCTGGGGTGTCACATGGAACTAAGAAACCTAGTAAAGTTGATTCTCCATCCTCGGTGGAATCCTTAACTGTGAAGAAAAAAGGTTTTGGTCGACCAAAAAAGATTGGGCGTGGGGCTGCAGGTCAAAGGCCTGCAACTGCAATACCAATGAAGGGAAAGAAAAGAGTTAGGACTAAGTCATAG 1191 0.4635 MGTEVMGRWGTWEELLLGGAVLRHGTRNWNVIAAELRARTVCPYTITPEVCKAKYEDLQQRYPGNKAWFEELRKSRVAELKRALELSEDSIGSLESKLESLEAGKNEKKMIVMLIKDQKLLERAESSTKTSKDGLSAGSFTHETRTNWSPECSVPAASAEDMEMKPEETKVLNVIDKLAHTIYEGQGGGSLKKRRGKRKRKDCASAFRRRLDSQKRGRYKKMILQHMDFDTIRSRISSQTIKSSVELFRDLLLLTNNALVFYSKSTREYKTALLLRGIVTKKMRESLKGMSNKTTTAQASNVPIKVPVHNPHVKPRSVRPGNRKIVAKAVGGNNSASGVSHGTKKPSKVDSPSSVESLTVKKKGFGRPKKIGRGAAGQRPATAIPMKGKKRVRTKS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1881 396 Coils Coil 77 97 - -
Aed4g1881 396 Gene3D - 192 303 IPR036427 GO:0005515
Aed4g1881 396 PANTHER BROMODOMAIN PROTEIN 1 205 - -
Aed4g1881 396 MobiDBLite consensus disorder prediction 330 396 - -
Aed4g1881 396 MobiDBLite consensus disorder prediction 333 358 - -
Aed4g1881 396 Pfam Bromodomain 199 272 IPR001487 GO:0005515
Aed4g1881 396 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 1 205 - -
Aed4g1881 396 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 204 395 - -
Aed4g1881 396 CDD Bromodomain 202 283 - -
Aed4g1881 396 PANTHER BROMODOMAIN PROTEIN 204 395 - -
Aed4g1881 396 MobiDBLite consensus disorder prediction 130 151 - -
Aed4g1881 396 ProSiteProfiles Bromodomain profile. 199 269 IPR001487 GO:0005515
Aed4g1881 396 SUPERFAMILY Bromodomain 197 287 IPR036427 GO:0005515
Aed4g1881 396 CDD SANT 8 55 IPR001005 -
Aed4g1881 396 MobiDBLite consensus disorder prediction 125 151 - -
Aed4g1881 396 SMART bromo_6 180 288 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1881 Aed-Chr4 22834934 22840179 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed4g1881 Bromodomain 3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1881 - - hbr:110670817 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1944 10 23656872 23660440 Aed4g1881 4 22834934 22840179 PCT