Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1856 ATGGAGTGCAATAAAGAAGAGGCTGTGAGGGCCAAGGAACTCGCTGAAAAGAAAATGCAAAACAAAGATTTCATTGGGGCTCGGAAATTTGTTCTTAAGGCTCAGCAGCTATTTCCTGATTTGGAGAATATCACTCAAATGCTTATTGTTTGTGATGTGCATTGCTCTGCTGAGCAGAAATTGTTTGGCAATGAGAGTGACTGGTATAAAACTCTTCAAGTTGAGCTAACAGCTAATGACACAACAATTAAGAAGCAATACAGGAAGTTTGCCCTCCAACTTCATCCCGACAAAAACAAGTTTGCTGGCGCAGAGGCTGCATTTAAGCTGATTGGGGAAGCCCAAAGAGTTCTTTTGGATAGAGAAAAACGATCTAGGCTTGACATGAATTTGCGCAGGGTTCCAATGAACAGAACTACTATGCCACCTCATCAACAGCATAATGTGCAGATGAATTTTAATCCTGTGATGCAAACCACTGTCAGGCCCAATTTTACAAACTTTATTCCTCAGCAGCAACAACAGTCTAGGCAGGCATCTCAGCATGGGCCTAATGGTGGCCGCCCTACTTTTTGGACTGTGTGCTCATTTTGTTCTGTTAGATACGAGTATTATAGGGAGGTTTTAAACAGATCTCTTCGCTGTCAAAGTTGCAATAGGCCCTTCATTGCATATGATGTGAATATGCAAGGCACAACACCAGCAACTAATTCAAGTCAGCAAGCTTTTGGTGCGAAGAACCATAGTCAGAATCATGGTGCTTTCAACGTTGGTGTTGGATCTGAAGGTAATTTGCATACTCGCAGGTCCAATACAGAATCTCATCAGAAAAAAGGTCCTACTGCAGATGCCTCTGTAAAGCCAAATGGAAAGAGAACGAGAAAGCGGGCAGCAGAATCCAGTGAAAGTGCTGAATCTGTAGGCAGCACTGATTCTGAATCTGAAGAGGATATGCTTTATAACAAGGATGGTTTTCCTGGTGTTTCCACTGATAGAGAAGGGAATCCACGTAGATCTACGCGGCAAAAGCATCAGGTTTCCTACAAGGAGAATGTGAGTGATGATGAAGGGGGTGGATCTCCATCTGGTGCTGGTGAAAATAGTGGGGAGGCAACTAAAGAGAATGATCAGAATGGTGATAAACAAGGGGTAAAGCAGAAGCAGAACTTTTTTTCTGAAGAGAGTTTACAAAATATAAATGAGGAAATGGAGGTGCGAGAAAAAGAGACAGTGAGCAGCTCAAAGATAGATAAAGCTTCAGAGCATTCACCCTTGAAATCAACAAATTCACCAGATAATTTTGTTTATCCAGATGCAGAGTTCAGTGACTTTGACAAGCACAAAAAAGAGGGGTCTTTTGCTGTTGGGCAGATTTGGGCTATTTATGATACTACAGATGGTATGCCCAGATTCTATGCTGTAATCAGAAAAGTTCTGTCTCCTGGATTCAAGTTGCGGTTAACGTGGTTTGAACCAGATCCAGATGAGCAAGATCAAGTCCACTGGGTAAAAGAGAAATTGCCAATTTCTTGTGGGAAACATAACCTTGGTCTCACTGAAACCACTGAAGATCGTCTGATGTTCTCTCATCTGATTGATTGTGAAAAGATTGGCCGCTGTACTTATAAAGTATATCCTAGAAAGGGAGAAACTTGGGCTATTTTTAAAAATTGGGATATCAAATGGCATATGGATGCAGAATCTCATCGGCAGTATGATTTTGAATTTGTTGAAATCTTGTCAGATTATGTTGAAGGTGTGGGAGTAGTTGTTGCATACTTGGCTAAATTGAAAGGTTTCGTGTGTCTCTTCTCTCGAATGGAGGGAGGTAATCACACATTTCAAATTCCATCAACTGAATTATTCAGATTCTCTCACAGGGTTCCATCTTTTAAAATGACTGGTCAGGAAAGAGTTGGTGTTCCTGTAGGATCTTATGAACTTGATCCTGTATCCTTGCCAATGAATCTTGAAGAGATTGCTGTTCCTGAAGATGTGGAAGTAAAGGTTGGTCATTGTCCATCTAGTGGGATGGGCTCAAGGTCTTCAGACATGTCAAAATTCACGATGAACTTGGAGGGAGATGCATCTACTGCAAAGGTTAAATTGGAAAGAAACAATTCAGTAGAGAACAAGGATCTCGTTGATCACGTTGGTAATGGTAGTGATCCTTCAACTGCAGATGCTTTTGAAATTCCAGATCCCAAGTTCTACAATTTTGACACTGAGAAGTCCCTTGAAAGGTTTCAGGTTGGTCAGATTTGGGCATTTTATGGTGATGAGGATGGACTGCCAAAATACTATGGTAAGATTAAGAGGGTTAAAACTAGTCCGGATCTTGAGTTGCAAGTTACTTATCTTACTAACTGCTGGCTACCGGCAAACAGTGTTAAATGGGAAGATAAGGATATGCTTATCTCCATTGGAAGATTTAAAATCAAAGCAGGTGCTCGTACCTGCACTTATAAAAACACCTATTCTGTTTCGCATCAGGTGCAGGTTATTACTGATGGTAAGAAGAAGGAATATGAAATTTTTCCAAGGGAAGGTGAAATCTGGGCATTGTATAAGAATTGGACCACTAAAATAAAACTTTCTGATTTGGAAAACCTGGAGTATGACATAGTTGAAGTTGTTGGAGAACATGATTTGTGGATGGATGTTTTACCTTTGGAGTTGGTAAGTGGTTATGATTCAGTTTTCAAGCACAAGTCAAATGCAGTATCAGCTAGGACCGTGAAAATATACTGGAAAGATTTGCTCAGGTTCTCCCACCAAATCCCTGCCTTCAAACTGACTGAAGAACATGATCTCAATCTGAGAGGCTTCTGGGAACTTGATCCGGGAGCAATACCCCTTCATTATTTTAACAACAAATAA 2880 0.408 MECNKEEAVRAKELAEKKMQNKDFIGARKFVLKAQQLFPDLENITQMLIVCDVHCSAEQKLFGNESDWYKTLQVELTANDTTIKKQYRKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDREKRSRLDMNLRRVPMNRTTMPPHQQHNVQMNFNPVMQTTVRPNFTNFIPQQQQQSRQASQHGPNGGRPTFWTVCSFCSVRYEYYREVLNRSLRCQSCNRPFIAYDVNMQGTTPATNSSQQAFGAKNHSQNHGAFNVGVGSEGNLHTRRSNTESHQKKGPTADASVKPNGKRTRKRAAESSESAESVGSTDSESEEDMLYNKDGFPGVSTDREGNPRRSTRQKHQVSYKENVSDDEGGGSPSGAGENSGEATKENDQNGDKQGVKQKQNFFSEESLQNINEEMEVREKETVSSSKIDKASEHSPLKSTNSPDNFVYPDAEFSDFDKHKKEGSFAVGQIWAIYDTTDGMPRFYAVIRKVLSPGFKLRLTWFEPDPDEQDQVHWVKEKLPISCGKHNLGLTETTEDRLMFSHLIDCEKIGRCTYKVYPRKGETWAIFKNWDIKWHMDAESHRQYDFEFVEILSDYVEGVGVVVAYLAKLKGFVCLFSRMEGGNHTFQIPSTELFRFSHRVPSFKMTGQERVGVPVGSYELDPVSLPMNLEEIAVPEDVEVKVGHCPSSGMGSRSSDMSKFTMNLEGDASTAKVKLERNNSVENKDLVDHVGNGSDPSTADAFEIPDPKFYNFDTEKSLERFQVGQIWAFYGDEDGLPKYYGKIKRVKTSPDLELQVTYLTNCWLPANSVKWEDKDMLISIGRFKIKAGARTCTYKNTYSVSHQVQVITDGKKKEYEIFPREGEIWALYKNWTTKIKLSDLENLEYDIVEVVGEHDLWMDVLPLELVSGYDSVFKHKSNAVSARTVKIYWKDLLRFSHQIPAFKLTEEHDLNLRGFWELDPGAIPLHYFNNK 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1856 959 MobiDBLite consensus disorder prediction 235 267 - -
Aed4g1856 959 MobiDBLite consensus disorder prediction 382 398 - -
Aed4g1856 959 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 957 - -
Aed4g1856 959 SMART dnaj_3 66 123 IPR001623 -
Aed4g1856 959 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Aed4g1856 959 CDD DnaJ 67 120 IPR001623 -
Aed4g1856 959 PANTHER - 1 957 - -
Aed4g1856 959 MobiDBLite consensus disorder prediction 235 431 - -
Aed4g1856 959 PRINTS DnaJ domain signature 69 87 IPR001623 -
Aed4g1856 959 PRINTS DnaJ domain signature 87 102 IPR001623 -
Aed4g1856 959 PRINTS DnaJ domain signature 103 123 IPR001623 -
Aed4g1856 959 MobiDBLite consensus disorder prediction 399 422 - -
Aed4g1856 959 Gene3D DnaJ domain 64 181 IPR036869 -
Aed4g1856 959 Pfam DnaJ domain 67 128 IPR001623 -
Aed4g1856 959 Pfam Domain of unknown function (DUF3444) 432 637 IPR024593 -
Aed4g1856 959 Pfam Domain of unknown function (DUF3444) 729 935 IPR024593 -
Aed4g1856 959 MobiDBLite consensus disorder prediction 334 351 - -
Aed4g1856 959 SUPERFAMILY Chaperone J-domain 65 153 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1856 Aed-Chr4 22656606 22660961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1856 4 227 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.047 4.10e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1856 - - gmx:100779228 1694.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1856 4 22656606 22660961 Aed4g1856 4 22656606 22660961 ECH