Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1855 ATGAACCAGTACCACATCTACGAAGCCATCGGTCGTGGCAGATACTCCACCGTTTACAAAGGCAGGAAGAAGAAGACCATCGAGTATTTCGCCATCAAAAGCGTCGATAAATCGCAGAAAACCAAAGTCCTTGAAGAGGTCAGGATTCTTCACACATTGGATCATCTAAACGTTCTGAAGTTTTACGATTGGTATGAAACTTCTGCTCACCTATGGTTGGTTTTGGAGTACTGTGTTGGAGGGGATGTGATTTCCATATTACGACAGGATAGTCAACTTCCTGAAGACTCGGTTCATGATCTTGCTTATGATCTAGCCAAAGCTTTGCAGTTTTTACATTCAAATGGAATAATTTATTGTGACCTGAAACCATCAAATATCCTACTAGATGAAAATGGATGTGCAAAGCTATGCGATTTTGGATTGGCTAGGAAGTTGAAAGATATATCAAAAGCTCCTTCTTCCTCGTTACCGCGAGCAAAACGTGGAACACCCTCTTACATGGCTCCGGAGCTTTTTGAGGATGGTGGAGTCCATTCTTATGCTTCTGATTTCTGGGCACTAGGTTGTGTACTATATGAATGTTATGCTGGGAGGCCACCCTTTGTGGGAAGAGAATTCACTCAGCTTGTAAAATCCATCATTTCAGATCCGACTCCACCTCTCCCTGGTAATCCAAGTCGACCTTTTGTCAATTTAATTAATTCCCTGTTGGTAAAAGACCCAGCTGAAAGAATACAGTGGTCTGAGCTTTGTGGACATGCCTTTTGGAGAGCCAAATTAACTCTGGTGCCTCTGCCTCCGCAACCTGCATTTGATGATATGATAGAGCCACATGCTAAACCATGCTTATCAGAACGTAATGGAGATAAAACTTCGCATAACAGGACCCCTCCCAAATGTCGTGAAAAAGATGTCAAAGGGGGGGTGTTGAAGAAGGATGAGAACTCTGTTTTAGGATCTAGAGGCATTGAGACACCAACAAGGGCAACGCCAAATAGCCACAGAACTCAGACAAAGGGTTCTGGCAGAACACATGAGGTAAAGCAGAAAGATCATTCCAATATTAACAAGGGTGTAAATCTTTTGAGACTGTCAAGAATAGCAAAAACAAATTTACAGAGAGAAAATGAGAAGGAAAACTACCGACGCCCGTTGCCTAATAACTCTGAGAATGACTCTGAAGTTAAAATTGAGAACACTGACATGGAACTTGATTTTAATGAGAATACTGAAGATGATGCACCTGAAGAAACTGATGGCACTGAACAAACGACTCCTGTGCCTGGTGAGAAAATGGACAATCATTTTCTGAATCAGGTAAAAGCAGAGGAGGTTGAAAATAATACACACCAGTTGGACACCCCATCTGTTGTTAACCCTCCAGTCTCAGATGATTCAAGGTCATTTGATCATGAATCAACTCCTGACATATCTTCTATTTCTCCCAGCGTGAGCCCTCATGTGAAGAAACATAGAGCTAAAGAAGACTCGGGATCTGGCCTTGACTCTGATTCTGCAAGGTTGTCTAACAACCTTTCCCAGGTTCTTTGGCATCCATCTGATCTCTCAGTCAGACCTGTAATGCCTAGCAGAAAAGTTGATAAAGTCTCAGAAGTCATTCCTTCACTCCCTTTTGAGGCATTGCAAGCATCTGATTTTGTCAAGATGCCTAAAGAGCAATTGGAGGCAGTCCACAACCGAATATTATCCATTTTGAATGGAAATACCAGCATTGGAGAGAAACAGAATGTGATTAGGTACCTTGAGATGTTGAGCAGTAATGCAGATGCAGCTAATATCTTGACCAATGGGCCAATAATGCTCATGCTTGTAAAATTGCTGCGTCAATCCAAGGCATCAGCTTTGCGTGTTCAACTTGCTTCACTGATCGGTTTGTTGATTAGGCACTCCACCTTTGTTGACGACAGTCTGGCTAGTTCTGGAATTTTAGGTGCACTCACTGATGGCCTTAGGGACAGGCAGGAAAAAGTAAGGAGGTTCTCCATGGCTGCTTTAGGTGAGTTACTATTTTATATATCCACTCAAAATGCGGACTGCAGGGATAACAATCAACTTGAATCTCCATCAAAGGACAATAGGATTGTGCATGGCTGGCAGGTTCCAAATTCATTAATAGCACTTGTGTCATCAATGTTGAGGAAGGGAGAGGATGATATAACTCAATTGTATGCATTGAGAACAATTGAGAATATTTGCAGTCAAGGAGGTTCTTGGGTGGGGCGTTTGTCCAGTCAAGATGTTATTAGTAATCTCTGCTATATCTATAGGGCGTCAGGGAAACAAGAGAGTGTGAGGCTCACTGCAGGATCGTGTTTGGGAAGAGATGACTTCCAAATAACTCTTCTTCGAATTTTTGAGTCTCTCACAGAGGAATCTCCTGTGATTCTTGGCAATCCTGACATTTTCATACGTGAAATCCTCCCTAGTTTGACAGTTCTCTACAAGGGTAACAAGGATGGTGATGCCAGATTTTTGTGCCTTAAAATATTTTTTGATGTGATGATCATTATTTTGAGTGAACCAATTGAAGAAGAGCAAAGATTGAAGGATCTGAAATTCGTATCTAATACCCGTTTCCTTCCTCTCTACCCAACCTTGATTGAAGACGAAGATCCTATTCCTATCTTTGCACAGAAGCTTCTTGTCATGCTACTGGAGTTCAGTTTTATTACAATTCCAGACATTCTACATCTGAAGACAATTTCGCAATGCTTTGAGTTCTTGCTTGGTGATCTCTCAAATGCAAATGTGAACAATGTTAAGCTGTGTCTTGCTCTGGCTTCTGCTCCTGAGATGGAGTCCAAATTACTCTCTCAGTTAAAGGTGGTTAGGAGGATTGGCAACTTTCTTGAGTTTGTATATGCAAAGGGCATGGAAGATTTGCTGGAACCGACTCTTGGGCTGTGTAGGGCTTTTCTAGCACGTTCTGTCAGCTGCACAAAAGGTTTCAGCTACACAACAGAACCAACTCTCTTAGGTGACTGTCCTCCCGAGTTGAGTGGTGGTGCTATTGATCCCCAGCAATGGATAAAAGATATAGCAGACTTCGGAAGCAATGTCGGTGTCTTGCTAGAGTTGAGTGCCTCTGCAGAAACCAGTGTTGCTGATATAGCTTCTGAATGTATTGTTTTACTACTCAAGGCAGCTCCTAGAGAAGCCACCACTGGTATACTAACCAATCTCCCCAAGGTGACTGTGATCCTAGAGAGCTGGAATAGAGGCATTCCTCACTTGATGGTGCAACGAATGCTTCATGCTTTAGGCTATGCTTGCAAGCAATACTTACTGCATGCAATGATATTATCAATCTCCAAACCTGAGATTTCAAGAATTGAAGTCATAGTTTCTGATCTCAAAAGTTCAGGTGTACCAACTTTAGCCAAAACAGCTGGGCTGGCAGCCTTGGAATTGCAGCGGTTGCCTCGCTGCATTTGA 3459 0.4247 MNQYHIYEAIGRGRYSTVYKGRKKKTIEYFAIKSVDKSQKTKVLEEVRILHTLDHLNVLKFYDWYETSAHLWLVLEYCVGGDVISILRQDSQLPEDSVHDLAYDLAKALQFLHSNGIIYCDLKPSNILLDENGCAKLCDFGLARKLKDISKAPSSSLPRAKRGTPSYMAPELFEDGGVHSYASDFWALGCVLYECYAGRPPFVGREFTQLVKSIISDPTPPLPGNPSRPFVNLINSLLVKDPAERIQWSELCGHAFWRAKLTLVPLPPQPAFDDMIEPHAKPCLSERNGDKTSHNRTPPKCREKDVKGGVLKKDENSVLGSRGIETPTRATPNSHRTQTKGSGRTHEVKQKDHSNINKGVNLLRLSRIAKTNLQRENEKENYRRPLPNNSENDSEVKIENTDMELDFNENTEDDAPEETDGTEQTTPVPGEKMDNHFLNQVKAEEVENNTHQLDTPSVVNPPVSDDSRSFDHESTPDISSISPSVSPHVKKHRAKEDSGSGLDSDSARLSNNLSQVLWHPSDLSVRPVMPSRKVDKVSEVIPSLPFEALQASDFVKMPKEQLEAVHNRILSILNGNTSIGEKQNVIRYLEMLSSNADAANILTNGPIMLMLVKLLRQSKASALRVQLASLIGLLIRHSTFVDDSLASSGILGALTDGLRDRQEKVRRFSMAALGELLFYISTQNADCRDNNQLESPSKDNRIVHGWQVPNSLIALVSSMLRKGEDDITQLYALRTIENICSQGGSWVGRLSSQDVISNLCYIYRASGKQESVRLTAGSCLGRDDFQITLLRIFESLTEESPVILGNPDIFIREILPSLTVLYKGNKDGDARFLCLKIFFDVMIIILSEPIEEEQRLKDLKFVSNTRFLPLYPTLIEDEDPIPIFAQKLLVMLLEFSFITIPDILHLKTISQCFEFLLGDLSNANVNNVKLCLALASAPEMESKLLSQLKVVRRIGNFLEFVYAKGMEDLLEPTLGLCRAFLARSVSCTKGFSYTTEPTLLGDCPPELSGGAIDPQQWIKDIADFGSNVGVLLELSASAETSVADIASECIVLLLKAAPREATTGILTNLPKVTVILESWNRGIPHLMVQRMLHALGYACKQYLLHAMILSISKPEISRIEVIVSDLKSSGVPTLAKTAGLAALELQRLPRCI 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1855 1152 CDD STKc_ULK4 3 257 - -
Aed4g1855 1152 MobiDBLite consensus disorder prediction 405 420 - -
Aed4g1855 1152 MobiDBLite consensus disorder prediction 447 507 - -
Aed4g1855 1152 SUPERFAMILY ARM repeat 557 842 IPR016024 -
Aed4g1855 1152 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Aed4g1855 1152 MobiDBLite consensus disorder prediction 371 386 - -
Aed4g1855 1152 MobiDBLite consensus disorder prediction 340 354 - -
Aed4g1855 1152 MobiDBLite consensus disorder prediction 282 312 - -
Aed4g1855 1152 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1855 1152 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 780 IPR044591 GO:0000911|GO:0000914|GO:0008017
Aed4g1855 1152 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 781 1149 IPR044591 GO:0000911|GO:0000914|GO:0008017
Aed4g1855 1152 Gene3D - 555 840 IPR011989 -
Aed4g1855 1152 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1855 1152 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1855 1152 MobiDBLite consensus disorder prediction 447 464 - -
Aed4g1855 1152 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Aed4g1855 1152 MobiDBLite consensus disorder prediction 321 339 - -
Aed4g1855 1152 MobiDBLite consensus disorder prediction 282 433 - -
Aed4g1855 1152 Gene3D Transferase(Phosphotransferase) domain 1 1 296 - -
Aed4g1855 1152 SUPERFAMILY Protein kinase-like (PK-like) 1 258 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1855 Aed-Chr4 22642596 22651364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1855 1 267 AGC Kinase Gene Family AT1G45160 32.039 3.47e-36 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Aed4g1855 Pkinase 1.7e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1855 K17545 - gmx:100817590 1460.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1855 4 22642596 22651364 Aed4g1855 4 22642596 22651364 ECH