Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1851 ATGAACACTAAACAAAAACAAAAACAGCTTCTCTTTTTCATCTTAGTTTTAGGAAAGTTAACATTTTTCAATATTATTCCAACAACGAATGCCCAAGTGAACCAGCGCGAGTGCCGCCAAACATGCGGTTCCTCGAAACCCTTCCCTTACCCTTTCGGATTCTCCTCCGGCTGCGCAATCCGCCTGAACTGCACCGCCGGCGTAGCCTCCGTGGGAGAATTCCCGGTCAAAGTCAACACAGACAACAACATGATGGTGAGCATCGAAGCCCAATGCCATCGCCCATTCGATAGTTTCCACCAACTCTTCAGCCACAAATACGCGCCCACTTCAAGAAACGTGATCCTCTTAGAGAACTGCACCGACACACCTTTACCCTGCTCCATACCGGAGACTCTGGTGCGGACCCACTTCGAATCCGTGGGCTGCAACGCCTCCGGCACCGGTGAACTCACCTGCTACTTCGAAAACAGAACCAACGGATTCGTCAATCATCGAATGTTGGAACAAACCGGGTGCAAGTACTTTATGTCGTCGCTTTTATCGCCGGAGTTTAAAAACGTTTCGGCTGAACCTGTGGCTTTGGATGTAAATATAATCGAACTTGGTTGGTGGCTCCAGGGAGATCGATGTTTATGTTCTGATCACGCCAATTGTACCAAGCTTGTGTCGCCGATGGACGAAAAGCCCGGTTTCTGGTGTCGCTGCCGCCACGGATTCGTCGGCGATGGCTTTTTGGCCGGAACAGGTTGCCGGAAAGTCTCGTTATGCAACCCAGCAAAATACATGTCAGGTCGATGTGGAGGATCAACGAGATTGATTGTCTTAATTGGAGGGTTTGTTATTGTTGCGACGCTGATGATTAGTCTTGGTTCATTATGTTGTTTCTTCCGTCGGCGTTCGAAATTGAGAGTGACAAAGAGCACAAAAAGGCGTTTAACTGAAGCCACTGGCAACAATAGTGTTCCAATCTATCCTTACAAAGACATTGAGAGAGCCACAAATAGTTTCTCAGAGAAGCAACGGCTTGGAACTGGAGCATACGGGACTGTTTATGCTGGAAGACTCTACAACGATGAATGGGTTGCCATTAAAAGGATAAAACACAGAGACAGTGATAGTATTGAACAAGTTATGAACGAGATCAAGCTTCTTTCCTCGGTGAGCCACTCCAATTTAGTTCGCTTGTTGGGTTGCTCCATTGAGTATGGAGAACAAATCCTGATTATAGATCCATTCCTTGAACCTGAAGTAAAAAATGATGCATGTACTCTTTCCTCCATACACAAGGTGGCTGAGCTCGCATTCAGATGCCTTGCGTTCCATAGGGACATGAGGCCTTCGATGACAGAAGTGGCTTCAGAGTTAGAGCAACTTAGGTTGAATCGATGGACAACATTGGGAGATAACATTAATTGTGCAACCTCAACGGAATTGTCCTCTTGCTCTTCCTCCTCAAGTGGAAGTGAGAAACCACTAAGCACGGTAATTGTACACTCGTTACAACGACCCATTAGTAATTCACCGGTCTCGGTTCAAGATCAAGAGTTGTGGTTGAGCGAGCAAAGCTCTCATTCGTCAAGCAAGTCATTTCACTAA 1599 0.4659 MNTKQKQKQLLFFILVLGKLTFFNIIPTTNAQVNQRECRQTCGSSKPFPYPFGFSSGCAIRLNCTAGVASVGEFPVKVNTDNNMMVSIEAQCHRPFDSFHQLFSHKYAPTSRNVILLENCTDTPLPCSIPETLVRTHFESVGCNASGTGELTCYFENRTNGFVNHRMLEQTGCKYFMSSLLSPEFKNVSAEPVALDVNIIELGWWLQGDRCLCSDHANCTKLVSPMDEKPGFWCRCRHGFVGDGFLAGTGCRKVSLCNPAKYMSGRCGGSTRLIVLIGGFVIVATLMISLGSLCCFFRRRSKLRVTKSTKRRLTEATGNNSVPIYPYKDIERATNSFSEKQRLGTGAYGTVYAGRLYNDEWVAIKRIKHRDSDSIEQVMNEIKLLSSVSHSNLVRLLGCSIEYGEQILIIDPFLEPEVKNDACTLSSIHKVAELAFRCLAFHRDMRPSMTEVASELEQLRLNRWTTLGDNINCATSTELSSCSSSSSGSEKPLSTVIVHSLQRPISNSPVSVQDQELWLSEQSSHSSSKSFH 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1851 532 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 409 494 IPR045274 GO:0007166
Aed4g1851 532 Pfam Protein tyrosine and serine/threonine kinase 340 411 IPR001245 GO:0004672|GO:0006468
Aed4g1851 532 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 27 409 - -
Aed4g1851 532 Gene3D Phosphorylase Kinase; domain 1 298 411 - -
Aed4g1851 532 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 409 494 - -
Aed4g1851 532 ProSiteProfiles Protein kinase domain profile. 337 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1851 532 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 27 409 IPR045274 GO:0007166
Aed4g1851 532 Gene3D Laminin 212 246 - -
Aed4g1851 532 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Aed4g1851 532 SUPERFAMILY Protein kinase-like (PK-like) 315 409 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1851 Aed-Chr4 22607795 22613295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1851 409 528 Receptor kinase-like Gene Family AT2G23450 48.148 3.52e-21 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aed4g1851 PK_Tyr_Ser-Thr 2.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1851 - - gmx:100777480 714.146