Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1849 ATGGGTCTTATGATTCAGTATCTGGTTGTTGGCATACTCTTAATTTCTTATTACTTAATCAAAAGGGCTACAGCAGGTTCTGGCCGCAAGCCACCCGAAGCAGGCGGTGGCTGGCCTTTGATCGGTCATCTTCACCTCTTAGGAGGTTCCAGTCAGGCACCTCACATAACCCTAGGAACCTTAGCAGACAAGTATGGCCCAATATTCAGCATCCGAATTGGGGTGCATCCAGCTGTGGTGGTCAGTTCTTGGGAATTAGCCAAAGAGTGTTACACCACTCTTGACGTCGTTATTTCTTCTCGTCCGAAATATACCGCTGCAAAAATCTTGGGCTACGACTATGCTAATTTTGGGTTCTGCCCTTACGGACACTACTGGCGTGAGATGCGCAAGATCATCGCTTCAGAGTTGCTTTCCACTTCCCGCTTTGAACTTGTTCAAGATATCAGAGACTCCGAGATGCAGAGCTCGTTGAAAGAATTATACAGAACATGGGTCAACAAAAGAGGCGTGTCGGGTGATTTGTTGGTGGAGATGAAACAGTGGTTTGGAGACGTGAACCTCAACGTAATTCTCAGGATGATTGCGGGGAAGCGATACTCCGCTGCCAAAACTGAAGATGAGCAACAAGTAAGGCGAATTCGGAGGGTTTTCAGAGCGTTCTTCCGTTTGACAGGCTTGTTTGTGCTTGGAGACGCGATTCCCTTTCTCTCGTGGCTTGATTTGGGAGGTGAAGTGAAGGAGATGAAAAAAACTGCTATAGAATTGGATGACATCGTTTCTGAATGGTTAGAAGAACATAGGCAGAAAACAGATTCAGGTGACACCAAGTTCAAAACAGAACAAGACTTCATCGATGTCTTGCTCTCCGTCCTTGACGGCGTCGACCTTGCCGGCTACAATTTTGACACCGTCATCAAAGCCACCTGCACGATGCTGATCGCAGGGGCAACTGATACAACAGCAGTTACCATGACATGGGCACTTTCGTTGTTGCTGAATAATCGTCATGCTTTGAAGAAAGTACAAGATGAACTGAATGAACAAGTGGGTAAGGAAAGATTAGTGAATGAATCTGACATTAACAAATTAGTTTACCTTCAAGCAGTGATAAAAGAGACACTGCGATTGTATCCAGCTGGGCCATTCTCGGGTCCGCGCGAATTCACGGAGGATTGCACCTTAGGTGGATACCATATCGAAGCAGGTACCCGATTCATGTTAAACATTTGGAAATTGCATAGAGATCCAAGTGTATGGTCAAACCCGTTAGAATTTCAGCCAGAAAGGTTCTTGAGCACCCACAAGGATATGGATGTGAAGGGTCAGCATTTTGAGCTACTTCCCTTTGGCGGTGGAAGAAGGTCGTGCCCTGGAATCTCATTTGGCCTTCAAATGACACACTTGGCTTTAGCTTCTTTTTTGCAGGCATTTGAAATCACAACCCCATCTAATGCTCAGGTTGATATGAGAGCTACTTTTGGACTCACAAACATGAAAACCACTCCTCTTGAGGTTTTAGTCAGACCCGCTTTATCACATCAGCTACTCTTTCTCGATGAAGCTTAG 1569 0.457 MGLMIQYLVVGILLISYYLIKRATAGSGRKPPEAGGGWPLIGHLHLLGGSSQAPHITLGTLADKYGPIFSIRIGVHPAVVVSSWELAKECYTTLDVVISSRPKYTAAKILGYDYANFGFCPYGHYWREMRKIIASELLSTSRFELVQDIRDSEMQSSLKELYRTWVNKRGVSGDLLVEMKQWFGDVNLNVILRMIAGKRYSAAKTEDEQQVRRIRRVFRAFFRLTGLFVLGDAIPFLSWLDLGGEVKEMKKTAIELDDIVSEWLEEHRQKTDSGDTKFKTEQDFIDVLLSVLDGVDLAGYNFDTVIKATCTMLIAGATDTTAVTMTWALSLLLNNRHALKKVQDELNEQVGKERLVNESDINKLVYLQAVIKETLRLYPAGPFSGPREFTEDCTLGGYHIEAGTRFMLNIWKLHRDPSVWSNPLEFQPERFLSTHKDMDVKGQHFELLPFGGGRRSCPGISFGLQMTHLALASFLQAFEITTPSNAQVDMRATFGLTNMKTTPLEVLVRPALSHQLLFLDEA 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1849 522 PANTHER CYTOCHROME P450 82C3-RELATED 7 516 - -
Aed4g1849 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Aed4g1849 522 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1849 522 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1849 522 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1849 522 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1849 522 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1849 522 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1849 522 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1849 522 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1849 522 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1849 522 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1849 522 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1849 522 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1849 522 SUPERFAMILY Cytochrome P450 37 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1849 522 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 516 - -
Aed4g1849 522 Gene3D Cytochrome P450 21 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1849 522 Pfam Cytochrome P450 35 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1849 Aed-Chr4 22600824 22603199 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1849 32 517 Cytochrome P450 AT4G31940 49.696 1.07e-178 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1849 - - gmx:100810391 873.618