Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1848 ATGGACGCAGCAACGGTTGCAGCTGGAATTTGTGTCTTACTGTTAATTTCTACTTACTTGATCAAACGGGCTACAGCAGGTTCTGGTCGCAAGCCACCGGAAGCAGGCGGTGGCTGGCCTTTGATCGGTCATCTTCACCTCTTCGGTGGTAAGCGTCTTTACGAAACCCTAGGAACCTTAGCAGACAAGTATGGCCCAATATTCAGCATCCGAATTGGCATGCACCCAGCCGTTGTGGTGAGCTCTTGGGAGTTAGCAAAAGAGTGTTTCACCACTCTTGACGCCGTCGTCTCATCTCGTCCCAAATTCACCGCTGCAAAAATCTTGACGTACAATTATGCTAGCTTTGCGTTCGCCCCTTACGGAGATTTCTGGCGCGAGATGCACAAGATTACGGTTTCAGAGCTTCTCTCCACTCGCCAGGCTGAACTGCTTCGAGGTATCAGAGAATCCGAGGTGAAGAGTTCGTTGAAAGAATTATACAGAGCGTGGACGGAGAAAAGAGGTGATAATTTGTTGGTGGAGATGAAGCAGTGGTTTGGAGAAATGAATCTGAACGTGATTCTCAGGATGGTTGCGGGAAAGAGATACAGTGTGGATGAGGAACAGCAGGCGAGGCAAGTTCGGAGGGTGCTGAGAGAGTTCTTTCATTTGATGGGATCGCTTGTGATTGGGGACGCGATTCCGTTTCTTGGGTGGCTTGATTTGGGAGGTGAAGTGAAGGAGATGAGAAAGACGGCTATGGAAATGGATGACATCGTTTCTCAATGGTTAGAAGAACATCGGCGGCGGAGGCAGAGAAGAGATTCGAGTGAAGCCGCCAAAACAGAGCAAGACTTCATGGATGTGTTGCTGTCTGCACTTGACAGTACTGTCGACCTTGACCTTGCTGGTTATGATGCTGACACTGTCATCAAAGCCACATGCTCGACACTAATTGCTGCAGCAACGGATACTACAACAGTTACCATGACTTGGATTCTGTCGTTATTGTTGAATAATCGGCATGCATTGAAGAGAGTTCAAGAGGAATTGGATGAGCATGTTGGCAAGGGAAGACTAGTGAATGAATCTGATATTAACAAATTAGTATACCTTCAAGCCGTGGTTAAAGAGACAATGAGGTTGTATGCAGCAGCACCACTTCCCGGTCCACGTGAATTCATAAGTGAGTGTACCTTGGGTGGCTACCGTATCCAAGCAGGTACAAGATTTATTCTGAACATCTGGAAGATGCAGAGAGACCCACGGTTATGGTCAGAGCCGTTAGAGTTTAAACCAGAAAGGTTTCTCACAACCCACAAGGGTGTGGATGTGAAAGGTCAACATTTTGAACTACTTCCCTTTGGTGCTGGAAGAAGGGCTTGCCCTGGCATGACATTCGCCCTTCAAATGACACACTTGGCATTAGCAACGCTTTTGCAGACATTTGAAGTCACAACCTTCAACAATGAACAGGTTGACATGAGTGCCACCTATCTGGTACCAAATATCCTGATGGATGCAGCAGCGGTTGTGGGCGTCGTAGTTGGTATCTTACTACTAATTTGTTACTACATGAATAGTGCAGGAGCAGGTTCTGATCGCAAGCCAAAGCCACCGGTAGCTGCCAGTGGCTGGCCTTTGATCGGGCACTTTAGTGGGTCCGGTGAGCTTCCTTACGAAGCCCTAGGAGGCTTAGCAGACAAGTATGGGCCAATATTCAGCATTCGAGTTGGTGTGCACCCAGAGGTGGTTGTGAGCTCTTGGGAGTTAGCGAAGGAGTGTTTCACCACTCTTGACGTCGTTTCCTCCTCTCGTTTCGAATTCACCGCTGCAAAAATCTTGCAATACGACTGCGCTAGCTTTGCGTTCGCCCCTTACGGAGATTTATGGCGTGTGATGCATAAGATTACTGTTTCAGATCTACTTTCCCCTCGCCGCTTGGAACTGCTTCGTGGCATTAGAGATTCCGAGGTGCGGAGCTCGTTGACGGAGCTATACAGAGCCTGGGCCGATAAAAGATGCGATAACTTGTTGGTGGAGATGAAGCAGTGGTTTGGTGATACGAATCTGAACGTGATTATGAGAATGGTTGCTGGGAAGAGATACTGTATTCGAAGTGAAGATGACGAGGAACAGGTCAAGCGAGTTCAGAGAGTACTAAGAGAGTTATTTCGTTTGTTGGGTTTGTTTGTGGTTGGGGACGCGATTCCTGTTCTTGGATGGCTTGATTTGGGTGAACATAAGTGGAGTAGAGATTCAGGAGATACTAAAACAGAGCAAGACTTCATTCATGTCTTGCTCTCCGTCCTTAACGGCGTCGACCTTGGTTATGATACTGACACTGTCATAAAAGCCACCTGCTCGACAATAATTGCTGCGGCGACGGATACTACAACGGTTACAATGACTTGGGCAATGTCGTTGCTATTGAATAATCACGATGCCCTAAAGAAAGTAGAAGAAGAATTAGATGAGCATGTGGGAAAGGAAAGACTAGTGAACGAATCAGACATTAACAAATTAGTATACCTTCAAGCCGTGGTTAATGAGACACTGAGATTAGACCCGCGTGTATGGTCAAACCGGTTAGAATTTCAGCCAGAAAGGTTCTTGAACACTCACAAGGATATGGATGTGAGGGGTCAGCATTTTGAGCTACTTCCCTTTGGTGGTGGAAGAAGATTGTGCCCTGGCATGCCATTTGCCCTTCAAATGACACATTTAGCATTAGCATCTTTTTTGCAGGCATTTGAAGTCACAACCCCAAACAATGCTCCAGTTGATATGACTGCCACATTTGGACTCACAGCTATCAAAACCACCCCACTTGAGATTTTAGCCAAACCCCGTTTACCATTTCAGATACTCCTTACCAATGGAACTAAGAAAAATCTACCACAATATTAA 2892 0.4668 MDAATVAAGICVLLLISTYLIKRATAGSGRKPPEAGGGWPLIGHLHLFGGKRLYETLGTLADKYGPIFSIRIGMHPAVVVSSWELAKECFTTLDAVVSSRPKFTAAKILTYNYASFAFAPYGDFWREMHKITVSELLSTRQAELLRGIRESEVKSSLKELYRAWTEKRGDNLLVEMKQWFGEMNLNVILRMVAGKRYSVDEEQQARQVRRVLREFFHLMGSLVIGDAIPFLGWLDLGGEVKEMRKTAMEMDDIVSQWLEEHRRRRQRRDSSEAAKTEQDFMDVLLSALDSTVDLDLAGYDADTVIKATCSTLIAAATDTTTVTMTWILSLLLNNRHALKRVQEELDEHVGKGRLVNESDINKLVYLQAVVKETMRLYAAAPLPGPREFISECTLGGYRIQAGTRFILNIWKMQRDPRLWSEPLEFKPERFLTTHKGVDVKGQHFELLPFGAGRRACPGMTFALQMTHLALATLLQTFEVTTFNNEQVDMSATYLVPNILMDAAAVVGVVVGILLLICYYMNSAGAGSDRKPKPPVAASGWPLIGHFSGSGELPYEALGGLADKYGPIFSIRVGVHPEVVVSSWELAKECFTTLDVVSSSRFEFTAAKILQYDCASFAFAPYGDLWRVMHKITVSDLLSPRRLELLRGIRDSEVRSSLTELYRAWADKRCDNLLVEMKQWFGDTNLNVIMRMVAGKRYCIRSEDDEEQVKRVQRVLRELFRLLGLFVVGDAIPVLGWLDLGEHKWSRDSGDTKTEQDFIHVLLSVLNGVDLGYDTDTVIKATCSTIIAAATDTTTVTMTWAMSLLLNNHDALKKVEEELDEHVGKERLVNESDINKLVYLQAVVNETLRLDPRVWSNRLEFQPERFLNTHKDMDVRGQHFELLPFGGGRRLCPGMPFALQMTHLALASFLQAFEVTTPNNAPVDMTATFGLTAIKTTPLEILAKPRLPFQILLTNGTKKNLPQY 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1848 963 Gene3D Cytochrome P450 851 946 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 SUPERFAMILY Cytochrome P450 539 945 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 Pfam Cytochrome P450 850 931 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 Pfam Cytochrome P450 538 718 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 Pfam Cytochrome P450 36 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 Pfam Cytochrome P450 741 851 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 PANTHER CYTOCHROME P450 82C3-RELATED 6 497 - -
Aed4g1848 963 PANTHER CYTOCHROME P450 FAMILY PROTEIN 504 849 - -
Aed4g1848 963 PANTHER CYTOCHROME P450 FAMILY PROTEIN 850 950 - -
Aed4g1848 963 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 Gene3D Cytochrome P450 527 850 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 SUPERFAMILY Cytochrome P450 38 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 Gene3D Cytochrome P450 19 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 497 - -
Aed4g1848 963 PANTHER CYTOCHROME P450 82C3-RELATED 504 849 - -
Aed4g1848 963 PANTHER CYTOCHROME P450 82C3-RELATED 850 950 - -
Aed4g1848 963 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Aed4g1848 963 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1848 963 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 884 893 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1848 Aed-Chr4 22595320 22599459 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1848 534 946 Cytochrome P450 AT4G31940 40.452 6.11e-112 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1848 - - gmx:100779080 810.831