LGRPv2

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Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed4g1848	ATGGACGCAGCAACGGTTGCAGCTGGAATTTGTGTCTTACTGTTAATTTCTACTTACTTGATCAAACGGGCTACAGCAGGTTCTGGTCGCAAGCCACCGGAAGCAGGCGGTGGCTGGCCTTTGATCGGTCATCTTCACCTCTTCGGTGGTAAGCGTCTTTACGAAACCCTAGGAACCTTAGCAGACAAGTATGGCCCAATATTCAGCATCCGAATTGGCATGCACCCAGCCGTTGTGGTGAGCTCTTGGGAGTTAGCAAAAGAGTGTTTCACCACTCTTGACGCCGTCGTCTCATCTCGTCCCAAATTCACCGCTGCAAAAATCTTGACGTACAATTATGCTAGCTTTGCGTTCGCCCCTTACGGAGATTTCTGGCGCGAGATGCACAAGATTACGGTTTCAGAGCTTCTCTCCACTCGCCAGGCTGAACTGCTTCGAGGTATCAGAGAATCCGAGGTGAAGAGTTCGTTGAAAGAATTATACAGAGCGTGGACGGAGAAAAGAGGTGATAATTTGTTGGTGGAGATGAAGCAGTGGTTTGGAGAAATGAATCTGAACGTGATTCTCAGGATGGTTGCGGGAAAGAGATACAGTGTGGATGAGGAACAGCAGGCGAGGCAAGTTCGGAGGGTGCTGAGAGAGTTCTTTCATTTGATGGGATCGCTTGTGATTGGGGACGCGATTCCGTTTCTTGGGTGGCTTGATTTGGGAGGTGAAGTGAAGGAGATGAGAAAGACGGCTATGGAAATGGATGACATCGTTTCTCAATGGTTAGAAGAACATCGGCGGCGGAGGCAGAGAAGAGATTCGAGTGAAGCCGCCAAAACAGAGCAAGACTTCATGGATGTGTTGCTGTCTGCACTTGACAGTACTGTCGACCTTGACCTTGCTGGTTATGATGCTGACACTGTCATCAAAGCCACATGCTCGACACTAATTGCTGCAGCAACGGATACTACAACAGTTACCATGACTTGGATTCTGTCGTTATTGTTGAATAATCGGCATGCATTGAAGAGAGTTCAAGAGGAATTGGATGAGCATGTTGGCAAGGGAAGACTAGTGAATGAATCTGATATTAACAAATTAGTATACCTTCAAGCCGTGGTTAAAGAGACAATGAGGTTGTATGCAGCAGCACCACTTCCCGGTCCACGTGAATTCATAAGTGAGTGTACCTTGGGTGGCTACCGTATCCAAGCAGGTACAAGATTTATTCTGAACATCTGGAAGATGCAGAGAGACCCACGGTTATGGTCAGAGCCGTTAGAGTTTAAACCAGAAAGGTTTCTCACAACCCACAAGGGTGTGGATGTGAAAGGTCAACATTTTGAACTACTTCCCTTTGGTGCTGGAAGAAGGGCTTGCCCTGGCATGACATTCGCCCTTCAAATGACACACTTGGCATTAGCAACGCTTTTGCAGACATTTGAAGTCACAACCTTCAACAATGAACAGGTTGACATGAGTGCCACCTATCTGGTACCAAATATCCTGATGGATGCAGCAGCGGTTGTGGGCGTCGTAGTTGGTATCTTACTACTAATTTGTTACTACATGAATAGTGCAGGAGCAGGTTCTGATCGCAAGCCAAAGCCACCGGTAGCTGCCAGTGGCTGGCCTTTGATCGGGCACTTTAGTGGGTCCGGTGAGCTTCCTTACGAAGCCCTAGGAGGCTTAGCAGACAAGTATGGGCCAATATTCAGCATTCGAGTTGGTGTGCACCCAGAGGTGGTTGTGAGCTCTTGGGAGTTAGCGAAGGAGTGTTTCACCACTCTTGACGTCGTTTCCTCCTCTCGTTTCGAATTCACCGCTGCAAAAATCTTGCAATACGACTGCGCTAGCTTTGCGTTCGCCCCTTACGGAGATTTATGGCGTGTGATGCATAAGATTACTGTTTCAGATCTACTTTCCCCTCGCCGCTTGGAACTGCTTCGTGGCATTAGAGATTCCGAGGTGCGGAGCTCGTTGACGGAGCTATACAGAGCCTGGGCCGATAAAAGATGCGATAACTTGTTGGTGGAGATGAAGCAGTGGTTTGGTGATACGAATCTGAACGTGATTATGAGAATGGTTGCTGGGAAGAGATACTGTATTCGAAGTGAAGATGACGAGGAACAGGTCAAGCGAGTTCAGAGAGTACTAAGAGAGTTATTTCGTTTGTTGGGTTTGTTTGTGGTTGGGGACGCGATTCCTGTTCTTGGATGGCTTGATTTGGGTGAACATAAGTGGAGTAGAGATTCAGGAGATACTAAAACAGAGCAAGACTTCATTCATGTCTTGCTCTCCGTCCTTAACGGCGTCGACCTTGGTTATGATACTGACACTGTCATAAAAGCCACCTGCTCGACAATAATTGCTGCGGCGACGGATACTACAACGGTTACAATGACTTGGGCAATGTCGTTGCTATTGAATAATCACGATGCCCTAAAGAAAGTAGAAGAAGAATTAGATGAGCATGTGGGAAAGGAAAGACTAGTGAACGAATCAGACATTAACAAATTAGTATACCTTCAAGCCGTGGTTAATGAGACACTGAGATTAGACCCGCGTGTATGGTCAAACCGGTTAGAATTTCAGCCAGAAAGGTTCTTGAACACTCACAAGGATATGGATGTGAGGGGTCAGCATTTTGAGCTACTTCCCTTTGGTGGTGGAAGAAGATTGTGCCCTGGCATGCCATTTGCCCTTCAAATGACACATTTAGCATTAGCATCTTTTTTGCAGGCATTTGAAGTCACAACCCCAAACAATGCTCCAGTTGATATGACTGCCACATTTGGACTCACAGCTATCAAAACCACCCCACTTGAGATTTTAGCCAAACCCCGTTTACCATTTCAGATACTCCTTACCAATGGAACTAAGAAAAATCTACCACAATATTAA	2892	0.4668	MDAATVAAGICVLLLISTYLIKRATAGSGRKPPEAGGGWPLIGHLHLFGGKRLYETLGTLADKYGPIFSIRIGMHPAVVVSSWELAKECFTTLDAVVSSRPKFTAAKILTYNYASFAFAPYGDFWREMHKITVSELLSTRQAELLRGIRESEVKSSLKELYRAWTEKRGDNLLVEMKQWFGEMNLNVILRMVAGKRYSVDEEQQARQVRRVLREFFHLMGSLVIGDAIPFLGWLDLGGEVKEMRKTAMEMDDIVSQWLEEHRRRRQRRDSSEAAKTEQDFMDVLLSALDSTVDLDLAGYDADTVIKATCSTLIAAATDTTTVTMTWILSLLLNNRHALKRVQEELDEHVGKGRLVNESDINKLVYLQAVVKETMRLYAAAPLPGPREFISECTLGGYRIQAGTRFILNIWKMQRDPRLWSEPLEFKPERFLTTHKGVDVKGQHFELLPFGAGRRACPGMTFALQMTHLALATLLQTFEVTTFNNEQVDMSATYLVPNILMDAAAVVGVVVGILLLICYYMNSAGAGSDRKPKPPVAASGWPLIGHFSGSGELPYEALGGLADKYGPIFSIRVGVHPEVVVSSWELAKECFTTLDVVSSSRFEFTAAKILQYDCASFAFAPYGDLWRVMHKITVSDLLSPRRLELLRGIRDSEVRSSLTELYRAWADKRCDNLLVEMKQWFGDTNLNVIMRMVAGKRYCIRSEDDEEQVKRVQRVLRELFRLLGLFVVGDAIPVLGWLDLGEHKWSRDSGDTKTEQDFIHVLLSVLNGVDLGYDTDTVIKATCSTIIAAATDTTTVTMTWAMSLLLNNHDALKKVEEELDEHVGKERLVNESDINKLVYLQAVVNETLRLDPRVWSNRLEFQPERFLNTHKDMDVRGQHFELLPFGGGRRLCPGMPFALQMTHLALASFLQAFEVTTPNNAPVDMTATFGLTAIKTTPLEILAKPRLPFQILLTNGTKKNLPQY	963

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed4g1848	963	Gene3D	Cytochrome P450	851	946	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed4g1848	963	SUPERFAMILY	Cytochrome P450	539	945	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed4g1848	963	Pfam	Cytochrome P450	850	931	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed4g1848	963	Pfam	Cytochrome P450	538	718	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed4g1848	963	Pfam	Cytochrome P450	36	489	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed4g1848	963	Pfam	Cytochrome P450	741	851	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed4g1848	963	PANTHER	CYTOCHROME P450 82C3-RELATED	6	497	-	-
	Aed4g1848	963	PANTHER	CYTOCHROME P450 FAMILY PROTEIN	504	849	-	-
	Aed4g1848	963	PANTHER	CYTOCHROME P450 FAMILY PROTEIN	850	950	-	-
	Aed4g1848	963	PRINTS	P450 superfamily signature	315	332	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed4g1848	Aed-Chr4	22595320	22599459	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed4g1848	534	946	Cytochrome P450	AT4G31940	40.452	6.11e-112	353

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed4g1848	-		-	gmx:100779080	810.831

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