Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1847 ATGGATCTGGAAAATCCCCTCTTACAATCAAGAGCATCATTTACCATTGTCTTGGGGCTGTTGTTATTGTTATTTCTCTTTGTTCTTTCATCCATATCCAGAAGATGCAAAAGCCACACCAGTGCAACAACTAGAAAAGAACCTCCAGAAGCAAGTGGTGCGTGGCCATTGATTGGGCACCTCCACCTCTTAGGTGGCGCAAAAGCACCTTACATCACGTTGGGCAACATGGCGGACAAATATGGCCCCATCTTCACGTTGCGTCTCGGTGTTCACAAAACGTTGGTTGTGAGCAATTGGGAAATGGCCAAACAGTGCTTTACCGTCAACGACAGAGCGTTCGCTAGCCGTCCAAAAGGTTTAGCCCAGGAAGTGATGGGCTACAACTCTTCTATGATTGGGTTCAGCCCATACGGGTCTTATTGGCGGCACATGCGCAAGATTGCCACGCAGGAGCTTCTTTCTGCTCACCGAATAGACATGCTCAAACACGTGATGGAGTCGGAGGTGAAGACAGCAGTGAAAGAGAGTTATAATATTTGGTTTAAGAACAGAAACAGTGGTTTCGAAATGAAGAGATGGTTCGGGGACATAATGTTAAACGTTTTGTTCAGAGCTGTGGTAGGAAAACGCTTTAGTGAGAATCAAGAGAATGAACGGATTCGGAAGGCGTTGAGGGACTTGTTTGATCTGAGCGGGAAGTTCACTGTGTCTGATGCTCTGCCATATTTGAGATGGTTGGATTTGGATGGAGCAGAGAAGAAAATGAAGAAGACGGCCGAAGAGTTAGATGGCTTTGCTCAACTTTGGCTAGGAGAACACAAACGCGACAGAAAATGTGATTCAGGTAACCAAGACTTCATCGACGTGCTTCTTAGACTTGTTGAGGAGGGTGAAGATTTTGTTGCTCATGACGCCGATACCACAATCAAAGCTACATGCCTGACCATACTTTTAGCTGGGTCAGATACTACAGCAGCAACATTGACTTGGAGTCTTTCATTGCTTCTGAATAATCGTGAAATCCTAAATAAGGCCATCAATGAATTAGACACACAAATTGGGAGTGAAAAGTTGGTAGAGATATCAGACTTGAAGAAGCTAGAGTATCTCCAATGTATCATCAAGGAAACACTACGTTTGTACCCAGCTGTACCACTTAATGTGCCACACGAGTCCATTGAAGATTGCATAATGGGTGGATTTCATGTACCAGCTGGCACACGTTTGTTGACTAATATTTCAAAACTTCAACGAGATCCATTGTTATATGATGATCCCTTAGAGTTTGACCCAGAGAGATTCTTAACAACTCATGAGGATGTGGACATCAGGGGTCAACATTTTGAATTGATTCCATTTGGTTCGGGGAGGAGAATATGTCCTGGAATCTCTTTCGATCTTCAAATAATGCGATTAACACTTGCCACTCTGCTACATGGATTTGACATTGTAACTCTTGATGGGAGACCTGTCGATATGCTTGAGCAAATTGGACTAACTAACATCAAGGCTTCTCCACTCCAAGTCATTCTCACACCTCGTCTCTCTACTTATATTTATGATCAAATTTAA 1575 0.4349 MDLENPLLQSRASFTIVLGLLLLLFLFVLSSISRRCKSHTSATTRKEPPEASGAWPLIGHLHLLGGAKAPYITLGNMADKYGPIFTLRLGVHKTLVVSNWEMAKQCFTVNDRAFASRPKGLAQEVMGYNSSMIGFSPYGSYWRHMRKIATQELLSAHRIDMLKHVMESEVKTAVKESYNIWFKNRNSGFEMKRWFGDIMLNVLFRAVVGKRFSENQENERIRKALRDLFDLSGKFTVSDALPYLRWLDLDGAEKKMKKTAEELDGFAQLWLGEHKRDRKCDSGNQDFIDVLLRLVEEGEDFVAHDADTTIKATCLTILLAGSDTTAATLTWSLSLLLNNREILNKAINELDTQIGSEKLVEISDLKKLEYLQCIIKETLRLYPAVPLNVPHESIEDCIMGGFHVPAGTRLLTNISKLQRDPLLYDDPLEFDPERFLTTHEDVDIRGQHFELIPFGSGRRICPGISFDLQIMRLTLATLLHGFDIVTLDGRPVDMLEQIGLTNIKASPLQVILTPRLSTYIYDQI 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1847 524 PANTHER CYTOCHROME P450 45 521 - -
Aed4g1847 524 Coils Coil 333 353 - -
Aed4g1847 524 Gene3D Cytochrome P450 33 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1847 524 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1847 524 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1847 524 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1847 524 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1847 524 PRINTS E-class P450 group I signature 102 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1847 524 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1847 524 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1847 524 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1847 524 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1847 524 Coils Coil 249 269 - -
Aed4g1847 524 Pfam Cytochrome P450 51 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1847 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Aed4g1847 524 PANTHER CYTOCHROME P450 82C3-RELATED 45 521 - -
Aed4g1847 524 SUPERFAMILY Cytochrome P450 53 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1847 524 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1847 524 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1847 524 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1847 Aed-Chr4 22590955 22594789 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1847 49 521 Cytochrome P450 AT4G31940 50.713 1.01e-176 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1847 - - gmx:100778017 797.734