Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1846 ATGGATTCCTCTTTGCAATTAAGTGTTATAGCCATTTTGGTATCCTTGTTAGTATTTGTCTGGCACAAGAAGAGAAATAAAGGAGGTAGTAATAGTAATAGTAAAGAGGCTCCTGTCCCAGGTGGTGCATGGCCACTTATTGGTCACCTACACCTTCTGGGTGGTGATGACCAACTTCTCTACCGAACACTTGGAACCATGGCTGACCAATATGGACCAGCATTCAACATGTGGCTTGGTACTCGGCGAGCATTTGTGGTCAGTAGCTGGGAAGTCGCAAAAGAATGTTTCACAACCAATGACAAGGCACTCGCCTCACGCCCCACAACAGTTGCTGCTAAGCACATGGGCTACAACTACGCTGTCTTCGGTTTCGCGCCCTACAGTCCCTTTTGGCGCGAGATGAGAAAGATTGCGACCCTTGAACTTCTCTCCAACCGCAGGCTCGAAATGCTCAAACACGTGAGAGTCTCCGAACTAAGCATGGGCATCAGGGACCTTTACAACTCTTGGCTCCAACAACAAAATAATAGGTCTCAGCCTCAGCCTCAGCCTCTGCTTCTGGAACTGAACCGCTGGTTGGAGGATTTGACTCTCAACATGGTCGTTAGAATGGTGGCAGGAAAACGCTACTTTGGTGCCTCGGCTAGCTGTGATGGTGATGATGATCAAGTAGCAAGGCGCTGCCAGAAGGCTATTAATCAGTTCTTTCATCTCATTGGGATTTTCGTGGTTTCGGACGCGCTTCCGTTTCTGCGTTGGTTCGATGTGCAAGGGCATGAGAGGGCCATGAAGAAAACTGCTAAGGACTTAGATGCCATACTTGAAGGGTGGCTAAAGGAGCACCGTGATGGTGGTCAGGTTAAGGCAGGGGGTGAACAAGATTTCATTGATGTCATGTTGTCGCTTCAGAAGGATGGTCAACTCTCAAATTTCCAATTTGATTCGGATACCAGCATCAAATCCACGTGCCTGGCTCTTATACTTGGTGGAAGTGATACCACAGCTGGCACGCTTACTTGGGCCATCTCATTACTCCTCAATAATCGTGAAGCATTGAAAAAGGCCCAAGAAGAATTGGACCTGAATGTTGGCATGGATCGGCAAGTTGAGGAGTCAGATGTTAGAAAGCTTGCATATGTTCAAGCCATAATCAAGGAAACCTTGCGGCTATACCCAGCTGGTCCCCTCCTGGGACCAAGGGAAGCCCAAGAAGATTGCAATGTTGCAGGCTATCATGTCCCTGCTGGGACCCGCTTGGTGGTTAACCTCTGGAAGATTCATAGGGATCCAAGGGTGTGGCAAGAGCCTTCTGCTTTTAGACCTGAGAGATTTCTGACAACTGATGCTGTTGATGTTAGAGGCCAAAACTTTGAGCTCATTCCCTTTGGCTCTGGTAGAAGGTCATGTCCTGGCATGTCCTTTGCACTCCAAGTTCTTCACTTGACGCTGGCTCGTCTGCTTCATGCATTTGAATTTGCAACCCCATCAGACCAACCGGTTGACATGACTGAGAGCCCTGGTTTAACAATTCCTAAGGCAACTCCTTTGGAGGTTCTTCTTACTCCACGCCTTCCACCCCAATTATATGCCTACTGA 1599 0.4828 MDSSLQLSVIAILVSLLVFVWHKKRNKGGSNSNSKEAPVPGGAWPLIGHLHLLGGDDQLLYRTLGTMADQYGPAFNMWLGTRRAFVVSSWEVAKECFTTNDKALASRPTTVAAKHMGYNYAVFGFAPYSPFWREMRKIATLELLSNRRLEMLKHVRVSELSMGIRDLYNSWLQQQNNRSQPQPQPLLLELNRWLEDLTLNMVVRMVAGKRYFGASASCDGDDDQVARRCQKAINQFFHLIGIFVVSDALPFLRWFDVQGHERAMKKTAKDLDAILEGWLKEHRDGGQVKAGGEQDFIDVMLSLQKDGQLSNFQFDSDTSIKSTCLALILGGSDTTAGTLTWAISLLLNNREALKKAQEELDLNVGMDRQVEESDVRKLAYVQAIIKETLRLYPAGPLLGPREAQEDCNVAGYHVPAGTRLVVNLWKIHRDPRVWQEPSAFRPERFLTTDAVDVRGQNFELIPFGSGRRSCPGMSFALQVLHLTLARLLHAFEFATPSDQPVDMTESPGLTIPKATPLEVLLTPRLPPQLYAY 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1846 532 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1846 532 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1846 532 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1846 532 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1846 532 PANTHER STEROID 21-HYDROXYLASE-RELATED 8 527 - -
Aed4g1846 532 SUPERFAMILY Cytochrome P450 43 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1846 532 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1846 532 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1846 532 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1846 532 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1846 532 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1846 532 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1846 532 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1846 532 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1846 532 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1846 532 Pfam Cytochrome P450 40 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1846 532 PANTHER CYTOCHROME P450 CYP82D47-LIKE 8 527 - -
Aed4g1846 532 Gene3D Cytochrome P450 27 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1846 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1846 Aed-Chr4 22588772 22590437 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1846 1 531 Cytochrome P450 AT4G31940 65.047 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1846 K23136 - gmx:100811993 941.414