Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1844 ATGTACACTACTTCTTCTCATACAGTTATAATGCCAACCTTTGCACCCTTGCTAGAGCCAGACCTCTCCTTAAACATAAGCCCACCCTTCACTTCAGATTCTGTCGACACCAAACAAGTGGGATTAACATCAACTACCAAAACGCTTTACAACGACATGTGCTCATCAACTTCGGATTCTGCAGGTAGCAGTGGAAGCGATTTAAGCCACGAAAATGGTTTTTTCCACACGCTTGGCCATCATGAACCGACATTGAGCTTAGGCATCGAAACACCAAATATGAATCCTCCTTATCCTGTCCAACAAGGACCACTGTCGACAAACTTCAGTCGTCACCTCCACACCAATACCCTAGATTTCAAGCCAAATGCTAGAGTCATTCATGGTGTCAAAAGAAACATCAGAGCTCCAAGAATGCGATGGACTACGACCCTCCATGCCCATTTTGTTCATGCGGTTCAGCTTCTTGGTGGTCATGAAAGGGCAACTCCGAAGTCTGTGTTAGAGTTAATGAATGTTAATGATTTAACTCTATCTCACGTGAAGAGTCACTTGCAGATGTATAGAACAGTGAAGACCTCTGACAAAGGCAGCGCAGGTAGTTGGATGTTCCCTCTCAAGGACCCCATTTTCGTTTCTTCTATTATTGTTATTCTCTTTGTTTGA 666 0.4369 MYTTSSHTVIMPTFAPLLEPDLSLNISPPFTSDSVDTKQVGLTSTTKTLYNDMCSSTSDSAGSSGSDLSHENGFFHTLGHHEPTLSLGIETPNMNPPYPVQQGPLSTNFSRHLHTNTLDFKPNARVIHGVKRNIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVNDLTLSHVKSHLQMYRTVKTSDKGSAGSWMFPLKDPIFVSSIIVILFV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1844 221 Pfam Myb-like DNA-binding domain 138 189 IPR001005 -
Aed4g1844 221 Gene3D - 136 193 - -
Aed4g1844 221 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 137 190 IPR006447 GO:0003677
Aed4g1844 221 SUPERFAMILY Homeodomain-like 134 191 IPR009057 -
Aed4g1844 221 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 6 200 - -
Aed4g1844 221 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 6 200 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1844 Aed-Chr4 22584400 22585561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1844 70 201 G2-like Transcription Factor Family AT5G42630 58.394 4.88e-44 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aed4g1844 Myb_DNA-binding 3.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1844 - - gmx:100804354 300.827