Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1825 ATGGAGGAAATTGAAGGCGTGAATTGTTGCAGTGAAACTGAAAGTAGGAGACCCAGTGAGACTCGACCTCCCAATCCCAACCCACCCTCATATCGCCAATGCAAACTTGTTCGCCACGCTTCTCTCCAGATGAAAACAAAGTTGTCTGATGTATCTGAGCCGGGGCTTGTCACTGAAGATTGTCAGTCTGATTTCTTTCCAACGCTTCGTTCTGGAGCTTGTGCTGATGTTGGATTCCGGACCAATATGGAAGATGTATATGTTTGTGTTGACAATTTTATGGAGGATTATGGACTCAAGAACCATACAGATGGGCCCAGTGCTTTCTATGGGGTATTTGATGGACATGGTGGAAAGCATGCTGCTGACTTTGCTTGTCATCAGCTGCCAAAGTTCATTGTTGATGACGAAGATTTCCCTAGAGATATTGAAAGGATAGTTGCTTCAGCATTTCTGCAAACAGACAATGCCTTTGCAGAAGCTTGCTCTCTGGATGCTGCACTTGCATCTGGCACCACTGCATTAGCCACTCTTGTTATAGGAAGGTTGCTGGTGGTGGCAAATGCTGGAGATTGTCGAGCTGTGCTGTGCCGTCGTGGAAAAGCAATTGAAATGTCGAGAGATCATAAACCAGGTTGCAATAAAGAAAAGAAGCGCATTGAGGCATCTGGGGGGCATGTCTACGATGGATATCTCAACGGACAACTTAATGTTGCTCGTGCACTTGGTGACTGGCACATGGAAGGAATGAAGAGCAAAGATGGTGGACCACTGACTGCAGAACCTGAACTCATGACTACAAAACTGACCGTGGAGGACGAATTTCTCATCATAGGTTGTGATGGGATTTGGGATGTATTTAGGAGCCAAAATGCAGTGGATTTTGCTCGGCGCAGACTTCAGGAACATAATGACCCGGCCATGTGTAGTAAGGATCTGGTTGATGAGGCTTTAAAGAGAAAAAGTGGAGACAATTTGGCTGCAGTTGTGGTTTGCTTCCAGCAGCAACCTCCTCCTAACTTGGTGGCACCGCGCTCGAGAGTGCAACGGAGCTTCTCTGCCGAAGGTTTGAAGGAGTTGCAAAGCTTCCTGGACAGCCTGGGTAATTGA 1110 0.4694 MEEIEGVNCCSETESRRPSETRPPNPNPPSYRQCKLVRHASLQMKTKLSDVSEPGLVTEDCQSDFFPTLRSGACADVGFRTNMEDVYVCVDNFMEDYGLKNHTDGPSAFYGVFDGHGGKHAADFACHQLPKFIVDDEDFPRDIERIVASAFLQTDNAFAEACSLDAALASGTTALATLVIGRLLVVANAGDCRAVLCRRGKAIEMSRDHKPGCNKEKKRIEASGGHVYDGYLNGQLNVARALGDWHMEGMKSKDGGPLTAEPELMTTKLTVEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPAMCSKDLVDEALKRKSGDNLAAVVVCFQQQPPPNLVAPRSRVQRSFSAEGLKELQSFLDSLGN 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1825 369 ProSitePatterns PPM-type phosphatase domain signature. 109 117 IPR000222 GO:0043169
Aed4g1825 369 Pfam Protein phosphatase 2C 72 325 IPR001932 -
Aed4g1825 369 SUPERFAMILY PP2C-like 65 335 IPR036457 -
Aed4g1825 369 MobiDBLite consensus disorder prediction 1 32 - -
Aed4g1825 369 Gene3D - 51 337 IPR036457 -
Aed4g1825 369 SMART PP2C_4 60 331 IPR001932 -
Aed4g1825 369 ProSiteProfiles PPM-type phosphatase domain profile. 70 333 IPR001932 -
Aed4g1825 369 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 45 355 - -
Aed4g1825 369 CDD PP2Cc 70 333 IPR001932 -
Aed4g1825 369 PANTHER PROTEIN PHOSPHATASE 2C 45 355 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1825 Aed-Chr4 22457070 22460818 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1825 1 369 PP2C-type Phosphatase Gene Family AT2G25620 66.414 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1825 K14803 - gmx:100815725 690.263