Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1820 ATGGGAACACCATTTAAGGGAATAATTCAAGATGTCAAGGGAAGAGCTAAATGCTATAAACAAGATTGGATTTGTGCAATCTGTTCTGGCGCTAGCATATTGGCTCCAACTTTCTACATATTCTTTGCTTCTGCTCTTCCTGTCATTGCTTTTGGAGAGCAACTTAATAGGCATACAGATGGAACCTTGAGCACAGTGGAAACATTGGCATCTACTGCTATTTGTGGAGTTATTCACTCATTATTTGGTGGCCAACCCTTGTTGATTTTAGGAGTTGCTGAACCCACTGTCATAATGTACACTTACCTGTACAGTTTTTGCCTAAAAACGCCTGAACTGGGTGGCAAGCTCTTTCTGGCTTGGTCTGGTTGGGTTTGTGTTTGGACGGGAATCTTTTTGATTCTCCTTGCAATTTTTAATGCTGGCACAATTATCAATAGGTTTACAAGAATTGCAGATGAGTTATTTGGAATGCTCATAACTGTTCTTTTCTTTCAAGAGGCTATAAAGGGATTGATAGGCGAGTTCAACACGCCCAAGAATGAAAATCCTTCCTCAGTGGAATTTCAATTCCAGTGGCTGTATACAAACGGATTACTTGCAATCATTTTTTGTTTTGGAGTACTCTTCAGTTCCCTTAAGAGCAGAAAAGCAAGAACGTGGCGATATGGAACAGGGTGGCTACGAGGATTTATAGCAGATTATGGGGTTCCAATGATGGTAGTGTTATGGACTGCACTATCTTATGCTGTACCAGGCAAAGTTCCAGATGGTGTTCCTAGAAGGCTCCTTACTCCCCTTCCCTGGGATCCTGTATCTGTCCATCACTGGACAGTGGTGAAGGACATGGGGAAGGTACCCGTTCTTTATATATTTGGGGCAATTATTCCAGCTCTGATGATAGCAGGCTTATACTTTTTCGATCACAGCGTAGCTGCACAGATGGCGCAACAGAAAAAATTTAACCTTCAAAAACCATCTGCCTACCACTATGATGTTTTGCTGCTTGGAATAATGACTCTGATTTGCGGGATCCTTGGCCTTCCTCCTTCAAATGGAGTCCTTCCACAGTCCCCCATGCATACAAAGAGTTTGGCCGTTCTTAGGAGGCGGTTGATCCGAAAGAAAGTGGTGGAGAGTGCTAAGGAATGTATTAAGCAACGAGGGAGCAACTCTGAATTATATGGAAAGATGCAAGCTGTGATTGTAGAAATGGATACAGACCCTACGGTTAAAGAATTGGAGAATTTGAAGGAAGCTGTAATGCAAACTGATAGCAAGGATGGTGCAGGGGAAAAATTTGATCCTGAGAAACACATAGATGAATATCTACCAGTGCGGGTTAATGAGCAAAGAGTGACCAACTTATTGCAGTCTCTCCTGGTGGGTGTATCAATCCTGGCCATGTCTGTTATCAAAAGGATACCAACCTCAGTTCTATGGGGATATTTTGCTTACATGGGAATTGATAGTCTCCCAGGGAATCAGTTATGGGAAAGGATATTGCTTCTCTTCATCACCCCAAGCCGGCGTTACAAAATTTTGGAAGGTTCTCATGCCTCTTTTGTGGAGACAGTACCATTCAAGACCATAGCTGCATTTACAGGCTTGCAGTTAGCATATTTAGCATTATGTTTCGGGGTGACTTGGATACCTATAGGTGGAATATTGTTCCCCGTATTATTCTTCCTTCTCATAATTATAAGAGAACGCTTGCTTCCAAAGATGTTCAAGCCTAGCCATCTTCAAGAGCTAGATGCTTCTGGGTATGAGGAAATTCCTGGTGCTCCACATATGAGGGACCTGAAAATGTGTAATCAGGATAAGGAGCCAGATACTGATTCTGATGGAAGCTCAGAAGACTTCTACGATGCAGAGATATTGGATGAGATGACAACCCACAGGGGAGAGTTGAAACTTAGGAGTGCAAGCAGCTTCAACGATAGAAACCACAGCTGCAGTGAAGACAGACACACTCAGGTTTATCCTGGTATTGTCTGA 2001 0.4273 MGTPFKGIIQDVKGRAKCYKQDWICAICSGASILAPTFYIFFASALPVIAFGEQLNRHTDGTLSTVETLASTAICGVIHSLFGGQPLLILGVAEPTVIMYTYLYSFCLKTPELGGKLFLAWSGWVCVWTGIFLILLAIFNAGTIINRFTRIADELFGMLITVLFFQEAIKGLIGEFNTPKNENPSSVEFQFQWLYTNGLLAIIFCFGVLFSSLKSRKARTWRYGTGWLRGFIADYGVPMMVVLWTALSYAVPGKVPDGVPRRLLTPLPWDPVSVHHWTVVKDMGKVPVLYIFGAIIPALMIAGLYFFDHSVAAQMAQQKKFNLQKPSAYHYDVLLLGIMTLICGILGLPPSNGVLPQSPMHTKSLAVLRRRLIRKKVVESAKECIKQRGSNSELYGKMQAVIVEMDTDPTVKELENLKEAVMQTDSKDGAGEKFDPEKHIDEYLPVRVNEQRVTNLLQSLLVGVSILAMSVIKRIPTSVLWGYFAYMGIDSLPGNQLWERILLLFITPSRRYKILEGSHASFVETVPFKTIAAFTGLQLAYLALCFGVTWIPIGGILFPVLFFLLIIIRERLLPKMFKPSHLQELDASGYEEIPGAPHMRDLKMCNQDKEPDTDSDGSSEDFYDAEILDEMTTHRGELKLRSASSFNDRNHSCSEDRHTQVYPGIV 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1820 666 PANTHER BORON TRANSPORTER-LIKE PROTEIN 1 662 - -
Aed4g1820 666 MobiDBLite consensus disorder prediction 646 666 - -
Aed4g1820 666 Gene3D Helical hairpin bin 15 57 - -
Aed4g1820 666 PANTHER ANION EXCHANGE PROTEIN 1 662 IPR003020 GO:0005452|GO:0006820|GO:0016020
Aed4g1820 666 Pfam HCO3- transporter family 4 179 IPR011531 GO:0006820|GO:0016021
Aed4g1820 666 Pfam HCO3- transporter family 446 536 IPR011531 GO:0006820|GO:0016021
Aed4g1820 666 Pfam HCO3- transporter family 196 371 IPR011531 GO:0006820|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1820 Aed-Chr4 22416102 22420343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1820 4 663 Antiporters AT5G25430 64.962 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1820 K24194 - gmx:100787412 1186.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1820 4 22416102 22420343 Aed4g1820 4 22416102 22420343 ECH
Aed4g1820 4 22416102 22420343 Aed6g1129 6 15899589 15905857 ECH
Aed6g1129 6 15899589 15905857 Aed4g1820 4 22416102 22420343 PCT