Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1819 ATGTCGTCGACGCGTGGGAAGAAGATGTTTCCAAAGTTGTGTTTCAGCCATGATGACGCTGCGGATGATGTGAAACACAGAGATGACATTGAGAATGATCAAATCACCAATGATGGAAGCCAATACAGTCTCAACGGCCTTCCGCTTCCGTCTCTCGGCGCCGCCAGCATCGGCCGCACCCAGAGTCGACGTCACAAGCTCCGGAGTTACATTATCTCGCCGTACAACCCTCATTACAGATTGTGGGAGACGTTTCTGGTGTTGTTAGTTTTCTACACTGCATGGGTTTGCCCTTTTGAGTTTGGATTCCTGAATGAACCTGCGGATCCTCTTTCCGCTGCTGACAATGTTGTGAACGGTTTTTTCGCCATCGACATTGTTCTGACCTTCTTTGTTTCCTACCTCGACAAGTCTACATATGTGCTCGTGGATAAACCAAAGTCCATTGCCTCGAGATATCTTAAAACATGGTTTGCCTTTGATTTCATCTCTACCATCCCTTCTGAACTTGCCCGCAGTGTCTTGCCCCCTTTTCTTAAGACCTATGGCTTCTTCAACATGCTCCGCCTTTGGCGTCTCCGCAGAGTCAGTGCTCTGTTTGCAAGATTAGAAAAGGACAAAAATTATAACTACTTCTGGGTGCGCTGTTCAAAGCTTATATGTGTTACTCTATTTTCAATGCATTTTGCTGCGTGCTTTTTCTACTTTCTTTCTTTAAATCGTGTACAAAGTTCAACATGGCTTAGCCTAGCTTCTGAGGACGCTCAAAACGGTCTTTGGCATCTCTATGTAACATCGATGTACTGGTCCATAACGACTCTTTCAGCAGTCGGTTATGGTGACCTGCATCCTATAAATACCCCGGAGATGGTGTTTGACATCTTCTTTATGCTCTTTAACATCGGACTTACCTCATATCTCATTGGAAACATGACAAACTTGGTTGTTCATGGAACAAGCAGAACTAGAAAATATAGAGACACGGTGCAAGCTGCAACAGGTTTTGCACATCGGAATCAGTTGCCTATCCGCTTGCAAGAGCAAATGCTTGCTCATTTGTTCATGAAGTACAGAACTGATTTAGAAGGATTGCAGCAACAAGAAATTATTGAATCCCTTCCAAAGGCTATTCGATCTAGCATCTCACACTACCTATTCTATCCACTAGTGGACAAAGTGTACTTGTTTCACGGAGTGTCAAGTGACCTATTCTTTCAACTGGTCACGGAGATGAGGGCGGAGTATTTTCCTCCAAAGGAAGACGTGATTTTGCAGAATGAAGCGCCAACAGACTTTTATATCTTTGTTACTGGTGCTGCAGTGGTTGGTCAGGTAGGGTCAGGAGATATAGTTGGAGAAATAGGAGTTTTATGTTACAGGCCACAGATATCTACAGTTCGAACCAAACGATTGAGCCAAATTCTGCGCTTGAACCGTACTACGTTTCTAAATCTTGTTCATTCAAATATTGGAGATGGGACAATAGTCATGAACAATTTTCTCCAGCATTTGCAAGAATCAAGTTATCCAGGGATGGATACTATTTTGGCAGAAACGGAGGCCATGCTTGCTCGTGGAAAAATGGACATGCCCATTACCACATGCTTTGCAGCAAGCAGAAATGATGATCTATTGTTACATCGTTTGCTTAAGAAGGGTTCAGATCCATATGAATTAGATAGGAATGGAAAGACAGCACTGCATATTGCAGCTTCCAAAGGCAATGAGCATTGTGTAACTTTGCTTCTAGAATATGGAGCTGATCCCAATACCAAAGATATGGATGGAAGTGTCCCACTATGGGAAGCAATGAAGGGTAGACATAAATCTGTGATGAAAATTCTGATAGACAATGGTGCAGACATATCTTTGGCCGATGCAGGCCATCTAGCATGCAGTGCTGTTGAGCAAAACAGCATGGAATTGCTCAATGAAATAATTAAATGTGGTGTGGATGTGACACAACCTAAAAACAATGGAACCACTGCTCTTCATGCTGCAATATTTGAAGGAAACACTGAGATTATTAACTTCCTTGTAGACCAAGGAGCATACATTGACATGCCAGATGCTAATGGGTGGAGTCCAAGGGCATTGGCAGAACAACATGAGCGTGAAGAAATTAAAAATATATTCAACAACATTAGAGAGAGCAGAAAACCAGGTTCCATTTCAATATCAAAGAGTATCAACAGAAGTAAGAGGCTTCTAAGTGATAACAGCATGTCTGCCACTTCCCAAGAAAGCATGCCACTACAACCTTATCATGGGAATAGAAGGTCTTCATGCTCTTTTGATAATTCCATCTTTGGAATGATCTCAACTGCCAAACGTGGTAATAAGAGGGATCACGAGGCAGCTGAAAGCAGTAGCACTAATAGAGGGAGTGTGAATGGATTAACCAGAGTGACACTTCGTTGTCCTGAAAAAGGTGAACATGCTGGAAAGCTTGTTTTGTTGCCCAACACCATTGAAGAGCTGCTAGATATTGGTGCCAAAAAGTTTGATATACTTGCCACCAAAATTTTGACATTAGATGAAGCTGAAGTAGATGATATAAATCTTCTACGAGATGGTGATCAGCTTATTATTGCTGGGATTGAAGGTTGA 2610 0.4245 MSSTRGKKMFPKLCFSHDDAADDVKHRDDIENDQITNDGSQYSLNGLPLPSLGAASIGRTQSRRHKLRSYIISPYNPHYRLWETFLVLLVFYTAWVCPFEFGFLNEPADPLSAADNVVNGFFAIDIVLTFFVSYLDKSTYVLVDKPKSIASRYLKTWFAFDFISTIPSELARSVLPPFLKTYGFFNMLRLWRLRRVSALFARLEKDKNYNYFWVRCSKLICVTLFSMHFAACFFYFLSLNRVQSSTWLSLASEDAQNGLWHLYVTSMYWSITTLSAVGYGDLHPINTPEMVFDIFFMLFNIGLTSYLIGNMTNLVVHGTSRTRKYRDTVQAATGFAHRNQLPIRLQEQMLAHLFMKYRTDLEGLQQQEIIESLPKAIRSSISHYLFYPLVDKVYLFHGVSSDLFFQLVTEMRAEYFPPKEDVILQNEAPTDFYIFVTGAAVVGQVGSGDIVGEIGVLCYRPQISTVRTKRLSQILRLNRTTFLNLVHSNIGDGTIVMNNFLQHLQESSYPGMDTILAETEAMLARGKMDMPITTCFAASRNDDLLLHRLLKKGSDPYELDRNGKTALHIAASKGNEHCVTLLLEYGADPNTKDMDGSVPLWEAMKGRHKSVMKILIDNGADISLADAGHLACSAVEQNSMELLNEIIKCGVDVTQPKNNGTTALHAAIFEGNTEIINFLVDQGAYIDMPDANGWSPRALAEQHEREEIKNIFNNIRESRKPGSISISKSINRSKRLLSDNSMSATSQESMPLQPYHGNRRSSCSFDNSIFGMISTAKRGNKRDHEAAESSSTNRGSVNGLTRVTLRCPEKGEHAGKLVLLPNTIEELLDIGAKKFDILATKILTLDEAEVDDINLLRDGDQLIIAGIEG 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1819 869 Pfam KHA, dimerisation domain of potassium ion channel 802 864 IPR021789 -
Aed4g1819 869 Pfam Ankyrin repeats (3 copies) 536 626 IPR002110 GO:0005515
Aed4g1819 869 Pfam Ankyrin repeats (3 copies) 630 702 IPR002110 GO:0005515
Aed4g1819 869 SUPERFAMILY Ankyrin repeat 535 713 IPR036770 -
Aed4g1819 869 SMART cnmp_10 395 501 IPR000595 -
Aed4g1819 869 PRINTS EAG/ELK/ERG potassium channel family signature 92 99 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed4g1819 869 PRINTS EAG/ELK/ERG potassium channel family signature 263 280 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed4g1819 869 PRINTS EAG/ELK/ERG potassium channel family signature 289 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed4g1819 869 PRINTS EAG/ELK/ERG potassium channel family signature 307 316 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed4g1819 869 PRINTS EAG/ELK/ERG potassium channel family signature 115 125 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed4g1819 869 PRINTS EAG/ELK/ERG potassium channel family signature 126 135 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed4g1819 869 ProSiteProfiles KHA domain profile. 802 869 IPR021789 -
Aed4g1819 869 SUPERFAMILY cAMP-binding domain-like 320 504 IPR018490 -
Aed4g1819 869 Pfam Ion transport protein 80 322 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aed4g1819 869 CDD CAP_ED 395 489 IPR000595 -
Aed4g1819 869 ProSiteProfiles Ankyrin repeat region circular profile. 595 626 - -
Aed4g1819 869 PANTHER POTASSIUM CHANNEL AKT1 2 868 IPR045319 GO:0005249|GO:0006813
Aed4g1819 869 Gene3D - 80 316 - -
Aed4g1819 869 ProSiteProfiles Ankyrin repeat profile. 659 691 IPR002110 GO:0005515
Aed4g1819 869 SUPERFAMILY Voltage-gated potassium channels 74 316 - -
Aed4g1819 869 SMART ANK_2a 595 624 IPR002110 GO:0005515
Aed4g1819 869 SMART ANK_2a 562 591 IPR002110 GO:0005515
Aed4g1819 869 SMART ANK_2a 626 655 IPR002110 GO:0005515
Aed4g1819 869 SMART ANK_2a 659 688 IPR002110 GO:0005515
Aed4g1819 869 ProSiteProfiles Ankyrin repeat profile. 562 594 IPR002110 GO:0005515
Aed4g1819 869 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 2 868 - -
Aed4g1819 869 PRINTS Ankyrin repeat signature 563 578 IPR002110 GO:0005515
Aed4g1819 869 PRINTS Ankyrin repeat signature 611 625 IPR002110 GO:0005515
Aed4g1819 869 ProSiteProfiles Ankyrin repeat profile. 595 627 IPR002110 GO:0005515
Aed4g1819 869 MobiDBLite consensus disorder prediction 736 758 - -
Aed4g1819 869 ProSiteProfiles cAMP/cGMP binding motif profile. 395 503 IPR000595 -
Aed4g1819 869 MobiDBLite consensus disorder prediction 777 797 - -
Aed4g1819 869 Gene3D Jelly Rolls 361 513 IPR014710 -
Aed4g1819 869 ProSiteProfiles Ankyrin repeat region circular profile. 659 690 - -
Aed4g1819 869 Pfam Cyclic nucleotide-binding domain 415 489 IPR000595 -
Aed4g1819 869 Gene3D - 531 714 IPR036770 -
Aed4g1819 869 ProSiteProfiles Ankyrin repeat region circular profile. 562 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1819 Aed-Chr4 22410440 22415905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1819 19 865 Ion Channels AT2G25600 56.617 0.0 976
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1819 K21867 - gmx:100786870 1427.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1131 6 15909649 15917308 Aed4g1819 4 22410440 22415905 PCT