Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1811 ATGCTGTTAGTTCTGTCTTCCTTGGTTTATGTTAGCCTCTTGCCTTTGTATTCTCTATTTGGTTTAACGTTCTTTTCCCGATCTAGATTTCTCAACCTCACCGAGGCAAAGAAGATGACTAAGAAGAAGAATCCGCTGGTGTTTATGGATGTGTCCATCGATGGGGATCCTGTTGAAAAGCTGGTTTTTGAGCTTTTCTACGATGTTGCTCCCAAGACTGCAGAAAACTTTCGTGCATTATGTACAGGAGAAAAGGGTATCAGTCCAAATACGGGAAAATCACTGCACTACAAGGGTTCTTTCTTCCATCAGATCATAAAAGGTTCCATTGTGCAGGGTGGAGATTTTGTCAATCGAAATGGTATTTGTCCGGGTTGCCAGCCTTGTTCCATTTGCATGTTTCCTGTGACAATGGGACTGCTGGAGAAAGCATATATGGTTCGAATTTCCCAGGTTAGAATGCCAAGTCACACTCTCAAGATCATATTTTGCATTATGTATGAGTCACCTAGGCTAAAGCATGATGGTACTGGCCTTTTATCAATGGCAACTGCAGACCGTGACACCCTTGGTTCTCATTTTATTATCACTTTGAAAGCTGATCATCATCTTGATAGGAAGCATGTAGTCTTTGGGAAGCTTGTGCAAGGGCATAATGTACTGAAGAAGATTGAAGAAGTAGGTGATGAAGAAGGGCATCCAACTGTAACTGTTAAAATCATTAATTGTGGCGAATATAGTGATGATGGAAAGAAGGTTAAATCAAAAATGGCAAAGAATAAAAAATCTTCAAAAGAAAGAAGGAAAAGGAGAAAGTACTACTCATCTGAATCGGGGAGCTCTTCAGATTCTGATACGGAATCTTCAGAAACTGATAGTGATTCTGAGTCAGATATGTCCTCATCATCTTACATGAGTTCTTCTAGTGATGACAGGCGAAGGAAGAGAAAGAGATCTAAGAAAGATAAATATAGACGGGGAAAAAGAAGAGATAAACGCCGTGACAAGAGGCGAAGGAGAAATAAGAGATCAAAGCGTAAATCAAAAAGGGAATCGGGCAGTGACTCAGATAGTGAGAGTAACAGTGACTGTAGCTCTGAAGGTGAAGGTATTGGTGCTCAACATAAGCGTAAAGATCATTCTCAGAAAAATGCTGAAATAAAGTCTCCCTTAGTTGCAGAGAAAGATTTGACTCCTGCGCATCGTGAAAAGGAGGAAGTGGGTATGCTCGAGAATGAGGAAAAATTCTCAAAGGAAAACGGAGATCGACGAAGCAATGGCATTGGAGGAGCTGATTACATATCTGACAGAAGTGAAGAGAGGCGGCCTGGCACTATCAATAATCATTCAGGCAAAACTAGGAGCCGAAGCATGAGTCCTAAGCGATCCATGAGTAAGAGTATGAGTATTAGTCCCAAGAGGAGTGCGAGCAAAAGCCCAAGTGTTACTCCCAAAAGGAGATTGAGCAAAAGTCCAAGTGTTAGAAGCCCTCCTCCATTACAGAGGAGTTTGAGCAGGAGTCCCGCCAGAAGCATCAGCAGGAGTCCGAGCAGAAGCATCAGTAGAAGCCCAGTGAGAGGCAGGAATGGGATAAGTGTCGGTAGAAGCCCAGTGAGAGGCAGGGATGGGAGAAGTGTCAGTAGAAGTCCAGTGAGAGGCAGGAATGGGAGAAATGTCAGTAGAAGCCCAGTGAGAGGTAGGAATGGGAGAAGTGTTAGTAGAAGCCCAGTGAGAGGCAGGAATGGGAAAAGTGTCAGTAGAAGCCCAGTAAGAGGAAGGAATGGGAGAAGTGTCAGTAGAAGCCCCGTGAGAACTCGTTCTCTTAGAAGTGTCAGCAAGAGCCCTGTAAGATCCCATTCTCGAAGCCACCGGAGCAGGAGTTCTCCCAGAGCAGCTCCATCAGGAAAAACTATCAGCAGAAGCCCCGTACGAGTGTTGAGAAAGAGTATAAGCTGCAGTCCAGTTAGATCACCTGTGAGAAGTTTAAGCAGAAGCTCTGGCAGGGTTCCTTCAAAGAGAAGCATCAGCCGAAGCCCAGTCAGAGCACCTAGTAGAAGCAATCGCCGCAGTTATTCTAGGAGTCCTAGCCCTGTTCGTAGGACAAGGACACCTCGAGGGAGAAGTGTGTCAAGGAGTGTATCACCTGATGCTTCGCCAAAGCGTATCAGAAGGGGAAGAGGTTTCAGTGAAAGATACTCTTATGCAAGAAGGTATAGAACCCCCTCTCGGTCTCCTGTGAGGTCATACCGCTACAATGGAAGAAATGATCGGGACAGATATTCTAATTTCAGAAGGTATTCCCCTAGGCGTTTCAGGAGCCCACCACGTGGAAGAACTCCCCCAAGCCGAAGTAGGAGCCCAGTTCGCAGTCGTTCCCCAGTTGAAACACATCGATCCCGCCCCTCTCGTGTGGAGAGGCATGCATCTTCTTCTCGAAGCAGGAGCAGGAGTCCATCGAAATCTGGGTCTAGGTCACCTGTGGAATCTCCGCCAAGACCAAGTAGAGACAGCAGGTCCAGGTCATCATCCGGAAGCCCAGATGGAAAGAAGGGCTTGGTCTCATATGGTGATGGTTCTCCATACTCAGGTGAAAGGCTAGAAAAGATGTCATCAGTGTCATCAGTATCTCGTGTTTTTGACACCATTACTGAATGTCTATCCCTGATTCAATCAGAGTCAATTGAAGTTCAGGAGAAAGCTCTTCAAACGCTTGCTTCCATCACCAAGGTCAGTCCCCAAAACAGAACCTTTGTAGCTCAAACAGATAATGCCATCCCAACATTAGCCACACTAACAAACTCTTCCTCTCCCATCATCCAAACACTTTCCTTGTTGACCCTCTTCAACCTATCCCTCAATCCTGATCTGAAGCAATCTCTTGCTGACATGGAAACCATTCACTACCTCAATTCCCTCATCACCTCAACAAGCTCCCTTGACTCCTCCAAATTGGCCTCCTCGTTGATTTGCAGCTTGGCCATGCATGACAAAAACAAGGCCAAGTTTGGGGTTGCAGGCACAGTTCAGTTGCTAGTAAAAGCCATCGAAGGCTCTGATCATGATGCACGCCACCTCTTGAGTTCTTTGGCTGAGCTTGTTCATTTTCATGGAAACTGCACTCTGGCCGTCCGATCCGGGGCAGTGCCAGCGCTGCTTCGGGTTGCCAAGGGCACCGAAAACGACGACTTAGCCGGTACTTCTCTTGCTGTTCTTAGTCTCCTTGCGAGGTTCGACGAAGGGTTGAATTGTTTGAAGAGAACCAATGAGATTGTTAAGGCTATGTTGAGTGTGATGAAAGGGAGGTCCTTGCTGAGTAAGGAGGGTGCTGCTGATATTCTTATTCGCCTTTTCGATGACAGCGAAGACTGTGTCATGGAGGCTTTGTTGTTGCCGGAATTTTCATTCGTGTTGGCTGATCTTTGTGTGAGGGGTTCTGTGAGAGTTCGAGACAAGGCAGATTTGTTGATGAAGAAGATGGCAAAGGTGAGTTTGGACTCTGATATGGAAGCATGCTCCCTGCATGGTTAA 3528 0.4606 MLLVLSSLVYVSLLPLYSLFGLTFFSRSRFLNLTEAKKMTKKKNPLVFMDVSIDGDPVEKLVFELFYDVAPKTAENFRALCTGEKGISPNTGKSLHYKGSFFHQIIKGSIVQGGDFVNRNGICPGCQPCSICMFPVTMGLLEKAYMVRISQVRMPSHTLKIIFCIMYESPRLKHDGTGLLSMATADRDTLGSHFIITLKADHHLDRKHVVFGKLVQGHNVLKKIEEVGDEEGHPTVTVKIINCGEYSDDGKKVKSKMAKNKKSSKERRKRRKYYSSESGSSSDSDTESSETDSDSESDMSSSSYMSSSSDDRRRKRKRSKKDKYRRGKRRDKRRDKRRRRNKRSKRKSKRESGSDSDSESNSDCSSEGEGIGAQHKRKDHSQKNAEIKSPLVAEKDLTPAHREKEEVGMLENEEKFSKENGDRRSNGIGGADYISDRSEERRPGTINNHSGKTRSRSMSPKRSMSKSMSISPKRSASKSPSVTPKRRLSKSPSVRSPPPLQRSLSRSPARSISRSPSRSISRSPVRGRNGISVGRSPVRGRDGRSVSRSPVRGRNGRNVSRSPVRGRNGRSVSRSPVRGRNGKSVSRSPVRGRNGRSVSRSPVRTRSLRSVSKSPVRSHSRSHRSRSSPRAAPSGKTISRSPVRVLRKSISCSPVRSPVRSLSRSSGRVPSKRSISRSPVRAPSRSNRRSYSRSPSPVRRTRTPRGRSVSRSVSPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRNDRDRYSNFRRYSPRRFRSPPRGRTPPSRSRSPVRSRSPVETHRSRPSRVERHASSSRSRSRSPSKSGSRSPVESPPRPSRDSRSRSSSGSPDGKKGLVSYGDGSPYSGERLEKMSSVSSVSRVFDTITECLSLIQSESIEVQEKALQTLASITKVSPQNRTFVAQTDNAIPTLATLTNSSSPIIQTLSLLTLFNLSLNPDLKQSLADMETIHYLNSLITSTSSLDSSKLASSLICSLAMHDKNKAKFGVAGTVQLLVKAIEGSDHDARHLLSSLAELVHFHGNCTLAVRSGAVPALLRVAKGTENDDLAGTSLAVLSLLARFDEGLNCLKRTNEIVKAMLSVMKGRSLLSKEGAADILIRLFDDSEDCVMEALLLPEFSFVLADLCVRGSVRVRDKADLLMKKMAKVSLDSDMEACSLHG 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1811 1175 MobiDBLite consensus disorder prediction 750 765 - -
Aed4g1811 1175 SUPERFAMILY ARM repeat 881 1159 IPR016024 -
Aed4g1811 1175 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 178 193 IPR002130 GO:0000413|GO:0003755
Aed4g1811 1175 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 206 221 IPR002130 GO:0000413|GO:0003755
Aed4g1811 1175 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 65 80 IPR002130 GO:0000413|GO:0003755
Aed4g1811 1175 PANTHER U BOX DOMAIN-CONTAINING 872 1168 - -
Aed4g1811 1175 MobiDBLite consensus disorder prediction 790 812 - -
Aed4g1811 1175 MobiDBLite consensus disorder prediction 249 865 - -
Aed4g1811 1175 MobiDBLite consensus disorder prediction 395 422 - -
Aed4g1811 1175 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 48 245 IPR002130 GO:0000413|GO:0003755
Aed4g1811 1175 SUPERFAMILY Cyclophilin-like 39 249 IPR029000 -
Aed4g1811 1175 Gene3D - 803 1130 IPR011989 -
Aed4g1811 1175 MobiDBLite consensus disorder prediction 370 385 - -
Aed4g1811 1175 MobiDBLite consensus disorder prediction 551 615 - -
Aed4g1811 1175 Gene3D - 32 246 IPR029000 -
Aed4g1811 1175 MobiDBLite consensus disorder prediction 654 715 - -
Aed4g1811 1175 MobiDBLite consensus disorder prediction 717 737 - -
Aed4g1811 1175 MobiDBLite consensus disorder prediction 814 848 - -
Aed4g1811 1175 MobiDBLite consensus disorder prediction 313 347 - -
Aed4g1811 1175 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 50 244 IPR002130 GO:0000413|GO:0003755
Aed4g1811 1175 MobiDBLite consensus disorder prediction 448 526 - -
Aed4g1811 1175 PANTHER KINESIN-ASSOCIATED PROTEIN 872 1168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1811 Aed-Chr4 22330077 22337915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1811 31 241 U-box Gene Family AT5G67530 30.841 1.95e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1811 - - gmx:121174819 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1811 4 22330077 22337915 Aed4g1811 4 22330077 22337915 ECH