Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1799 ATGAATGGTCAGAATGCAAAGACCAACTTTCCCACCTCAAAGAACCAACAAGCTGAAGACAACAGCAACAATAACAACAACACTTTCTCATCTCCAAAAGCACTTTCAGAACTCCTAAGCACAAAGCTGAGAAAGTACTGCAAAGACCCTGCTCCTTCACTCACATGTCTGAGGCTAGATGCTGACAACTCCCACATCGGATTATTAAAGCAACGCCTTGAAAAGAATCAGCCAAAGCTGTCAAGTTACAGCTAG 255 0.4314 MNGQNAKTNFPTSKNQQAEDNSNNNNNTFSSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGLLKQRLEKNQPKLSSYS 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1799 84 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SHINE 2 1 72 - -
Aed4g1799 84 MobiDBLite consensus disorder prediction 1 33 - -
Aed4g1799 84 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1799 Aed-Chr4 22237880 22240343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1799 1 72 AP2-EREBP Transcription Factor Family AT5G11190 61.111 6.71e-28 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1799 - - gmx:100806821 117.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1799 4 22237880 22240343 Aed4g1799 4 22237880 22240343 ECH
Aed4g1799 4 22237880 22240343 Aed6g1147 6 16163823 16165495 ECH
Aed6g1774 6 21205133 21206149 Aed4g1799 4 22237880 22240343 ECH