Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1793 ATGAGATTAGGTGTGAGTACGAGTAAGCAAGTTGTGCTTGTGCGGTGCTCAATCGGCACTGTTTCAGTTTCAGGCGACACCCAAACAGATTTTCCCGCCAAATTCCAACGTTCATCTTTCTCAACTGTCAACAATGCTTCTTCAGATTTAGCGGTTTCAATTTCAAGTAGCAGCAGCAGGAGAGGAATAATACGCATAGCCACGTTGCCATGTCTTCTTCCCCTCATAGGTTGTCTCCCAGCCAACGCCATGCAGCCAGATACAAAGGAATATCTTCTCATTAAAGAAGAGGTGAGGAAGGTATTGTCAAAGGTAAAGGCTGCTGGCGTGCTTCGATTGGTTTTCCACGATGCCGGAACCTTTGACATCGATGACAGTACAGGTGGTATGAATGGTTCTATAATCTATGAACTTGAAAGACCTGAAAATGCTGGCCTGAAAAAATCAGTTCTGCAAAAAGCAAAGACTCAGATAGATGCTGTCCAACCAGTATCTTGGGCGGACATGATTGCTGTGGCTGGAGCTGAAGCAGTTGAAGTATGTGGAGGTCCACCTATCCAAGTTTCACTGGGCAGACCAGATACACTGGTGCCGGATCCAGAAGGGAGACTTCCTGAGGAATCTCTCAATGCTTCTGGTTTGAAGAAATCTTTCCAGAGCAAAGGCTTTTCAACACAAGAACTTGTGGCTTTGTCTGGAGCCCACACTATTGGAAATAAAGGTTTTGGAAGTCCAATTTCTTTTGACAATTCATATTATAAGGTTCTTTTGGGGCAGCCGTGGACATCTCCAGGTGGTATGTCAAGTATGGTTGGCCTTCCTTCAGATCACGCTCTTGTTGAGGATGATGAATGCTTAAGATGGATTAAAAAATACGCAGACAGTGAGAATCTGTTCTTTGAAGATTTCAAAAATGCGTATGTCAAGCTGGTGAATTCTGGTGTGAGGTGGAATAGCTTGTAA 963 0.4424 MRLGVSTSKQVVLVRCSIGTVSVSGDTQTDFPAKFQRSSFSTVNNASSDLAVSISSSSSRRGIIRIATLPCLLPLIGCLPANAMQPDTKEYLLIKEEVRKVLSKVKAAGVLRLVFHDAGTFDIDDSTGGMNGSIIYELERPENAGLKKSVLQKAKTQIDAVQPVSWADMIAVAGAEAVEVCGGPPIQVSLGRPDTLVPDPEGRLPEESLNASGLKKSFQSKGFSTQELVALSGAHTIGNKGFGSPISFDNSYYKVLLGQPWTSPGGMSSMVGLPSDHALVEDDECLRWIKKYADSENLFFEDFKNAYVKLVNSGVRWNSL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1793 320 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 11 317 IPR044831 GO:0004601|GO:0034599
Aed4g1793 320 PRINTS Haem peroxidase superfamily signature 107 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g1793 320 PRINTS Haem peroxidase superfamily signature 227 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g1793 320 PRINTS Haem peroxidase superfamily signature 182 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g1793 320 PRINTS Haem peroxidase superfamily signature 164 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g1793 320 Gene3D - 95 314 - -
Aed4g1793 320 SUPERFAMILY Heme-dependent peroxidases 106 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed4g1793 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 227 237 IPR019793 -
Aed4g1793 320 Gene3D Peroxidase, domain 2 205 307 - -
Aed4g1793 320 Pfam Peroxidase 96 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g1793 320 ProSitePatterns Peroxidases active site signature. 107 118 IPR019794 GO:0004601
Aed4g1793 320 PRINTS Plant ascorbate peroxidase signature 291 315 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed4g1793 320 PRINTS Plant ascorbate peroxidase signature 107 122 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed4g1793 320 PRINTS Plant ascorbate peroxidase signature 125 135 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed4g1793 320 PRINTS Plant ascorbate peroxidase signature 203 220 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed4g1793 320 PRINTS Plant ascorbate peroxidase signature 163 181 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed4g1793 320 PRINTS Plant ascorbate peroxidase signature 182 194 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed4g1793 320 PRINTS Plant ascorbate peroxidase signature 221 242 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed4g1793 320 PANTHER L-ASCORBATE PEROXIDASE 6-RELATED 11 317 - -
Aed4g1793 320 ProSiteProfiles Plant heme peroxidase family profile. 107 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1793 Aed-Chr4 22186865 22190345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1793 93 315 Peroxidase AT5G40150 30.714 2.46e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1793 K00434 - gmx:100792735 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1793 4 22186865 22190345 Aed4g1793 4 22186865 22190345 ECH
Aed4g1793 4 22186865 22190345 Aed6g1151 6 16206081 16208393 ECH