Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1784 ATGGCACAAGGTACTGCTACTCCACCAGTTCCTTTTGATTTTGAACTCGTGGTTGGTGATCACCTTAGAACTGTCACAGCCTCATCCAGCAGCACAGACCCATGGATTGAACCTGAAAGGTTGAAACTCAGACACAGGATTGGTCGGGGACCCTTTGGTGATGTTTGGTTAGCAACTCATCATCAATCAACTGAAGATTATGACGAGTACCATGAAGTTGCTGCCAAGATGTTACCTCCAATCAGAGAGGAACATATGAAGACTGCATTTGAGAAATTTTGTGAATTATATTTTCAGTGCCAAGGAGTGGCTAGGGTGTGCTGGCTACTTGGAATTTCAATTATAAATGGAAGGATATGCATCATTATGAATTTTTATGAGGGTTCAGTTGGTGACAAGATGGCTAGACTCAGAGAGGGAAGGATTTCATTGCCTAATGTTCTGAGGGTGGAGGGGGAAAAGATGGTCAATACTAAGGGCATTTTACGGGCTGCAGAACTTCACTCAAAAGGGATCCTAGTTCTCAACCTTAAACCATGTAATGTGCTTCTTGATGATACTGATCAAGCAATACTGGGAGATATTGGTATTCCAACTCTTCTGTTTGGTTCCTCGTTTCTAAGCTCAGATATGGCCAACAGGCTTGGCACTCCAAACTACATGGCTCCAGAACAATGGCAACCAGAAGTCAGAGGCCCTATATCCTTTGAAGCAGATTCATGGGGATTTGGGTGCACTATTGTGGAAATGTTGACTGGTAATCAACCTTGGTATGGGTGTCCTGTTGGTGAAATATACCGATCGGTTGTTGAAAAGTATGAAAAGCCCCAGATTCCTAGTGGCCTTCCTTCTTCAGTTGAAAATATCCTCAGTGGTTGCTTTGAATATGATTTGAGGAATCGCCCTTCAATGGTAGATATTCTGGCTGTCTTTAGGAGCTCACTGAATGTAGTAGCCAATGATGGAGGATGGATATATCTTGGAACTAACAAAACTATAGCAAAATCAAGTAGCACTGGCTACACTCAGTGGTCCCTCTCAAAGGATCATCTTCAGGTGGGTGATACAGTGCGCTCTCGAAAGCCTTCTAATTCTTGCAATCCTCAAAACATGGAGGTCCCTGAAGGAACTGTTGTTGGTTTAGAACGTAATACAGATCATGGATTTGTCTTAGTGAGGCTCCATGGTGTTCATGACCCTGTAAGGATTCATACATCAACTCTTGAACGTGTCACCAATGGTTTAGGAGCCGGGGATTGGGTACGCTTGAAGGAAGAAGATGAGAAGCACTCGCCAGTGGGTATTCTTCATTCTATCAATCGTGATGGCAGAGTGACCGTTGGGTTTATCGGTCTGCAAACTCTTTGGAACGGTAACTCTTCAGAACTTGAAATGGCAGAACCTTACTGTGTGGGCCAGTTTATCAGGCTGAAAGCCAATGTTTTGAGTCCTCGATTCGAATGGCTGCGTAAAAGGGGAGGTGCCTGGGCTACTGGTAAGATTTCTTGGATCCTACCAAATGGATGTCTAGTTGTCAAGTTTCCAGGCATGTTGAACTTTTGGGATGCACCAAGCACTGTCTTGGCGGATCCCTCCGAGGTTGATGCAGTTAATTTTAAGAATTGTCCAAATATGATAGAGAAGTATCAACATGTAGAGGATCACCACTGGGCAGTTAGACCTGTTCTAATTGCATTTGGCCTTCTTACTTCTGTGAAACTAGGAATGTCTGTTGGAAAGAAATTTGGGAGGAACATGAATGGTAATGCTAATGCTAATGCAATGGAGAGTGAAAGTCATTATGCAGATATTAGCCAGAATGCTAGCAACCCTACATGGACATCTTCAGTAGCTAACATGCTTTTCAGAGAAGGTGTTAACTAG 1884 0.4342 MAQGTATPPVPFDFELVVGDHLRTVTASSSSTDPWIEPERLKLRHRIGRGPFGDVWLATHHQSTEDYDEYHEVAAKMLPPIREEHMKTAFEKFCELYFQCQGVARVCWLLGISIINGRICIIMNFYEGSVGDKMARLREGRISLPNVLRVEGEKMVNTKGILRAAELHSKGILVLNLKPCNVLLDDTDQAILGDIGIPTLLFGSSFLSSDMANRLGTPNYMAPEQWQPEVRGPISFEADSWGFGCTIVEMLTGNQPWYGCPVGEIYRSVVEKYEKPQIPSGLPSSVENILSGCFEYDLRNRPSMVDILAVFRSSLNVVANDGGWIYLGTNKTIAKSSSTGYTQWSLSKDHLQVGDTVRSRKPSNSCNPQNMEVPEGTVVGLERNTDHGFVLVRLHGVHDPVRIHTSTLERVTNGLGAGDWVRLKEEDEKHSPVGILHSINRDGRVTVGFIGLQTLWNGNSSELEMAEPYCVGQFIRLKANVLSPRFEWLRKRGGAWATGKISWILPNGCLVVKFPGMLNFWDAPSTVLADPSEVDAVNFKNCPNMIEKYQHVEDHHWAVRPVLIAFGLLTSVKLGMSVGKKFGRNMNGNANANAMESESHYADISQNASNPTWTSSVANMLFREGVN 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1784 627 SUPERFAMILY Protein kinase-like (PK-like) 38 309 IPR011009 -
Aed4g1784 627 Pfam Protein tyrosine and serine/threonine kinase 41 308 IPR001245 GO:0004672|GO:0006468
Aed4g1784 627 PANTHER OS06G0639500 PROTEIN 6 626 - -
Aed4g1784 627 Gene3D Phosphorylase Kinase; domain 1 19 126 - -
Aed4g1784 627 Gene3D Transferase(Phosphotransferase) domain 1 158 343 - -
Aed4g1784 627 ProSiteProfiles Protein kinase domain profile. 41 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1784 627 PANTHER OS06G0639500 PROTEIN 6 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1784 Aed-Chr4 22133378 22136659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1784 29 318 MAP Kinase Kinase Kinase AT2G17700 25.253 1.16e-16 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Aed4g1784 PK_Tyr_Ser-Thr 6.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1784 - - gmx:100780636 1138.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1784 4 22133378 22136659 Aed4g1784 4 22133378 22136659 ECH
Aed4g1784 4 22133378 22136659 Aed6g1154 6 16235239 16241829 ECH
Aed6g1154 6 16235239 16241829 Aed4g1784 4 22133378 22136659 PCT