Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1783 ATGTTCGCCGAAGAGAATGGCCTCAAAGGAGACCCCAGACTCCAAGCCATTTCCCAAGCTATCAGAGTCGTCCCTCACTTCCCCAAACATGGAATAATGTTCCAAGACATAACGACATTGCTGTTGGATCACAAGGCGTTTAAAGACACGGTCGACATTTTTGTCGATCGTTACAGAGACATGCACATTTCAGTTGTTGCCGGAATTGAGGCAAGGGGGTTCATATTTGGTCCCTCAATTGCGTTGGGCATTGGTGCAAAGTTTGTTCCTTTACGCAAACCGCGGAAGCTGCCAGGTGAAGTGATATCAGAAAAGTATGCTCTAGAATATGGAACTGATTGTCTGGAGTTGCATGTTGGTGCTGTCCAGCCGGGTGAAAGGGCCATAGTGATTGATGATTTGGTGGCCACAGGTGGAACTCTTTCAGCAGGAAACGTGTTGGGGCTGAAGTGGTGGAATGTGCTTGTGTCGTTGGTGTGCCTAATGTCAAGGGGCAGTGCAGGCGTATTGGAAAGCCACTTTATGTTCTTGTTGAACCGCGTAAAGCAGATACATGTCAAGCTCAGGCAGATAAATGTTACTAATGAGATGGTTGGAAAGGACGCTTCGCTTCGTTCGTGTGAGAAATGTGATCCTTAA 639 0.4726 MFAEENGLKGDPRLQAISQAIRVVPHFPKHGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMHISVVAGIEARGFIFGPSIALGIGAKFVPLRKPRKLPGEVISEKYALEYGTDCLELHVGAVQPGERAIVIDDLVATGGTLSAGNVLGLKWWNVLVSLVCLMSRGSAGVLESHFMFLLNRVKQIHVKLRQINVTNEMVGKDASLRSCEKCDP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1783 212 CDD PRTases_typeI 51 143 IPR000836 -
Aed4g1783 212 SUPERFAMILY PRTase-like 20 164 IPR029057 -
Aed4g1783 212 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 1 150 - -
Aed4g1783 212 Hamap Adenine phosphoribosyltransferase [apt]. 17 190 IPR005764 GO:0003999|GO:0005737|GO:0006168
Aed4g1783 212 Pfam Phosphoribosyl transferase domain 43 143 IPR000836 -
Aed4g1783 212 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 1 150 - -
Aed4g1783 212 Gene3D - 6 173 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1783 Aed-Chr4 22118964 22123607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1783 1 147 PRT Gene Family AT5G11160 81.633 6.71e-85 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1783 K00759 - gmx:100499904 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1783 4 22118964 22123607 Aed4g1783 4 22118964 22123607 ECH
Aed4g1783 4 22118964 22123607 Aed6g1156 6 16266947 16270224 ECH
Aed6g1156 6 16266947 16270224 Aed4g1783 4 22118964 22123607 PCT