Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1753 ATGGCAAGATCACAACAGCGATACCGAGGCGTCCGACAAAGGCATTGGGGATCTTGGGTCTCCGAAATTCGACACCCCATATTAGCCTATGATGAAGCAGCAAGGCTAATGTGTGGCACAAGAGCAAGGACAAACTTCCCTTACAACCCCAATGCGTCTCAGTCATCATCTTCGAAGCTTCTCTCAGCAACTTTAACTGCAAAACTGCATAGGTGCTACATGGCCTCTTTGCAAATGACAAGGCCATCATCACAGGCAGAGCCACAGAGAGTGGCTTCACCGAATGTCATCACCTCCTCCTCCATGAAGAGTAACGAAACTGTTACAATGTTGCCACAGAAGAGACAAGAAGAGGGGGAAGAATTAGCAGATGGGAATTGGGTTTTCAAGAAGGTTAAGGTTGAAACTGCTCAGCAATTCAAGCCTCTTGAAGAGGACCACATCGAGCAAATGATAGAGGAGTTGCTGCATTACGGTTCCATTGAGCTTTGCTCTGTGAATGTGATTCCACCACAGGCTCTTTGA 525 0.4724 MARSQQRYRGVRQRHWGSWVSEIRHPILAYDEAARLMCGTRARTNFPYNPNASQSSSSKLLSATLTAKLHRCYMASLQMTRPSSQAEPQRVASPNVITSSSMKSNETVTMLPQKRQEEGEELADGNWVFKKVKVETAQQFKPLEEDHIEQMIEELLHYGSIELCSVNVIPPQAL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1753 174 CDD AP2 6 49 IPR001471 GO:0003700|GO:0006355
Aed4g1753 174 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003-LIKE 1 167 - -
Aed4g1753 174 ProSiteProfiles AP2/ERF domain profile. 7 40 IPR001471 GO:0003700|GO:0006355
Aed4g1753 174 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 167 - -
Aed4g1753 174 SUPERFAMILY DNA-binding domain 7 49 IPR016177 GO:0003677
Aed4g1753 174 SMART rav1_2 7 53 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1753 Aed-Chr4 21912115 21912864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1753 1 174 AP2-EREBP Transcription Factor Family AT5G25190 58.333 1.39e-63 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1753 - - gmx:100804510 293.893