Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1749 ATGACCGTTGAGAAGAAAGTATATGATTCCGGCGACGAGTTTCCCGTCGGAATGCGTGTTCTTGCCGTCGACGATGACCCCACTTGCCTCTTGGTTTTGGAAACTCTCCTCCGAAGATGTCAATATCATGTAACCACGACTAATCAAGCAATAAAGGCGTTGGCGCTGTTGAGAGAACACAAAGACAAGTTTGACCTTGTAATCAGTGATGTGCACATGCCAGACATGGATGGATTTAAGCTGCTTGAGCTTGTGGGACTTGAGATGGATCTTCCTGTCATAATGTTATCTGCAAATGGTGATACGAAGCTGGTGATGAAGGGGATTTCTCATGGAGCGTGTGATTATCTGCTGAAACCTGTGAGAATGGAGGAGCTCAAAAACATTTGGCAGCATATAATCAGGAGGAAGAAGTTTGACCCAAAGGAGAAGAACAAAACCAGCAACCTAGACAAACCTACTTCTAATAGTGGCAATGAGGCTGTACCTAAAAAAATTCTTGATATGATGAATGTTGAAAAACTTACAAGGGAGAATAAGTATAGGCTTTATCTGAAAAGAATTAGCTGTGTGGCTAACCAGCAAGCCAGTATGGTGGCAGCCTTAGGGGGTGCAGATCCATCCTATTTGAGAATGAATTCTGTGAGCGGGGTTGGACACATACAAACATTGAGTGGTTCTGGACATCTTCATAACAATGCTTTCAGATCCTTTCCACCTAGTGGGATAATTAATAGATTGAACACTCCTGCTGGTTTGAATGTGCGTGGATATCCTCCTTCTGGAGTACTTCAATTGAGTCAATCACAAAACCTGAACAACGCCAATGATCATCTTAAGTTCCAGTCAGCCATTGTTCCTGTTGATCAGAATCGAGTTCAGGGAATGACAGTGTCTGTAGGGCTCGATCAACTGCAAAACAATAAGGGTGTTATGTCTGGTCAAAACCTGACCACTGTTTTTGATGCCAAAACAACTTTTCCCATCTCAAATAAACTCCCAGATCCAAGACCAAAAATAACCAACTCTGGCTCTCACACTCCAGGCATGGGTTTCTCAAACAATGCCTTGATGTTGGAACCACGCTGTCAAGGCACACAAGGGAGTGTAAGAATTGAAAGTTTATCTCCTTCAGTAGCCTCTCAACATTCAGAATTTTCTTTGCCTTCGCTGGATCAAGGTAGATATAGTGATAATTGGACAAGTGCTGTGCAGCCATCTGTGATCCAGACAAACTCTTACCCTCCAAGTGAATGTTTCAGACAGACTAATATACCTCCTATGGATAACATGGCTTCTGTACCCTTGCAAGGTGGGAATCTAAGTGGTTCATCCATCACTTCTGTGCCATTTCAAGGGTGGGATGACCATAATCAGGATGCTACTCAACATTCAAATATTATATCAATGAACTCACTGGCTCCAGTCAATGGTGCTGCTGTTCCAGCTGGCCGTGCAGCAACAAACTCAGCCTTACACAGAAATTTTGACTTTAATTATTGTGATCCCTTACAAATGAAGCATGATGGGTTTGTGGAGTTAACTGACGATACCTTATCGAAACAACATCAGGGGAATATCATGAACCAGCAAAAATCTCAACAAAGTCATTTCTCTAATAATCTTGGTTCACTGGAAGACTTGGTCAGTTCAATGATGAAACAGGAGAAAGATAAGATTATATTGGATGGAAACTTCATTTGCAATAATTACACTGGTGGGCGTGGGTTATGA 1734 0.4227 MTVEKKVYDSGDEFPVGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTNQAIKALALLREHKDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDTKLVMKGISHGACDYLLKPVRMEELKNIWQHIIRRKKFDPKEKNKTSNLDKPTSNSGNEAVPKKILDMMNVEKLTRENKYRLYLKRISCVANQQASMVAALGGADPSYLRMNSVSGVGHIQTLSGSGHLHNNAFRSFPPSGIINRLNTPAGLNVRGYPPSGVLQLSQSQNLNNANDHLKFQSAIVPVDQNRVQGMTVSVGLDQLQNNKGVMSGQNLTTVFDAKTTFPISNKLPDPRPKITNSGSHTPGMGFSNNALMLEPRCQGTQGSVRIESLSPSVASQHSEFSLPSLDQGRYSDNWTSAVQPSVIQTNSYPPSECFRQTNIPPMDNMASVPLQGGNLSGSSITSVPFQGWDDHNQDATQHSNIISMNSLAPVNGAAVPAGRAATNSALHRNFDFNYCDPLQMKHDGFVELTDDTLSKQHQGNIMNQQKSQQSHFSNNLGSLEDLVSSMMKQEKDKIILDGNFICNNYTGGRGL 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1749 577 CDD REC_typeB_ARR-like 20 134 - -
Aed4g1749 577 Gene3D - 16 134 - -
Aed4g1749 577 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR10 1 151 - -
Aed4g1749 577 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR10 160 553 - -
Aed4g1749 577 SUPERFAMILY CheY-like 17 142 IPR011006 -
Aed4g1749 577 SMART REC_2 18 130 IPR001789 GO:0000160
Aed4g1749 577 PIRSF RR_ARR_type-B 1 160 IPR017053 GO:0003677|GO:0003700|GO:0009736
Aed4g1749 577 PIRSF RR_ARR_type-B 158 573 IPR017053 GO:0003677|GO:0003700|GO:0009736
Aed4g1749 577 MobiDBLite consensus disorder prediction 141 161 - -
Aed4g1749 577 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
Aed4g1749 577 Pfam Response regulator receiver domain 20 128 IPR001789 GO:0000160
Aed4g1749 577 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 151 IPR045279 GO:0009736
Aed4g1749 577 PANTHER TWO-COMPONENT RESPONSE REGULATOR 160 553 IPR045279 GO:0009736
Aed4g1749 577 Gene3D - 135 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1749 Aed-Chr4 21841525 21846271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1749 1 249 Response Regulator Gene Family AT4G31920 49.677 2.24e-80 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed4g1749 Response_reg 2.2e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1749 - K14491 gmx:100809002 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1202 6 16770313 16775690 Aed4g1749 4 21841525 21846271 PCT