Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1736 ATGATGGAACAGATCAAACGTGAAATCTCCGTGATGCGTTTGGTGCGACATCCAAACGTGGTGGAACTCAAGGAAGTGATGGCCACCAAGACTAAAATCTTCGTCGTCATGGAATACGTGCGTGGCGGCGAACTCTTCGCCAAAATCTCCAAAGGCAAACTCAAAGAAGATCTCGCCCGCAAGTATTTCCAGCAGTTAATCAGCGCCGTTGATTACTGCCACAGCAGAGGAGTATCCCACCGTGATCTCAAACCAGAGAATCTACTCCTCGACGACGAGGAGAATCTTAAAATCTCTGATTTCGGACTCTCTGCGCTTCCGGAACAGCTTCGTTACGATGGACTCCTCCACACGCAGTGCGGCACCCCTGCCTACGTGGCACCCGAAGTGCTGAGAAAAAGAGGCTACGACGGGTCCAAAGCCGATATATGGTCATGCGGCGTCATTTTGTACGTTCTCCTCGCTGGCTTTCTTCCTTTTCGACACGAGAATCTCATGACCATGTATAACAAAGTTCTCAGAGCAGAGTTTGAGTTTCCACCGTGGTTTTCGACTGATTCGAAGAGGTTGATCTCGAAGATTCTCGTGGCGGACCCGGCCAAGAGGACAACGATCTCCGCAATCACGCGCGTGCCGTGGTTCCGGAAAGGATTTTCCTCGATTTCCACGCCGGACACGTGTCAGTTCGAGAAACATGAGGCCGTTACGGAGGAAGGTGGTAATGATTCCAATTCCAAGGTGCCGAAGTTCTTCAACGCGTTCGAGTTTATTTCTTCGATGTCGTCCGGGTTCGACCTCTCGGGGCTGTTCGAGAGCAAGAAGAAGACGGCGGCGGTGTTCACGTCAAAGTGTTCGGCGGCGGCGATTGTGGCCAAGATTGCGGCGGCGGCGCGGGGGTTGAGTTTCCGCGTGGCGGAGGTGAAGGACTTCAAGATCCGGCTGCAGGGCGCGGTGGACGGTAGGAAGGGGAGGTTGGCGGTCACGGCGGAGGTCTTCGAGGTGGCGCCGGAGTTCGCCGTCGTGGAGTTTTCGAAGTCCGCCGGGGATACGTTGGAATACGCCAAGTTTTGTGAGGAGGACGTGAGGACCGCGCTGAAGGACATTGTGTGGACGTGGCAAGGGGATGCCACGTGTACTGCTAACGTCCCCGCCTGTCACGGTGAGGAGTGTCAAAAGCAGGTTGTTATTACTACTATATAA 1200 0.5417 MMEQIKREISVMRLVRHPNVVELKEVMATKTKIFVVMEYVRGGELFAKISKGKLKEDLARKYFQQLISAVDYCHSRGVSHRDLKPENLLLDDEENLKISDFGLSALPEQLRYDGLLHTQCGTPAYVAPEVLRKRGYDGSKADIWSCGVILYVLLAGFLPFRHENLMTMYNKVLRAEFEFPPWFSTDSKRLISKILVADPAKRTTISAITRVPWFRKGFSSISTPDTCQFEKHEAVTEEGGNDSNSKVPKFFNAFEFISSMSSGFDLSGLFESKKKTAAVFTSKCSAAAIVAKIAAAARGLSFRVAEVKDFKIRLQGAVDGRKGRLAVTAEVFEVAPEFAVVEFSKSAGDTLEYAKFCEEDVRTALKDIVWTWQGDATCTANVPACHGEECQKQVVITTI 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1736 399 Gene3D Kinase associated domain 1, KA1 246 371 - -
Aed4g1736 399 SMART serkin_6 3 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1736 399 ProSiteProfiles NAF domain profile. 246 271 IPR018451 GO:0007165
Aed4g1736 399 Pfam Protein kinase domain 3 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1736 399 Gene3D Transferase(Phosphotransferase) domain 1 45 220 - -
Aed4g1736 399 Pfam NAF domain 248 305 IPR004041 GO:0007165
Aed4g1736 399 PANTHER - 1 383 - -
Aed4g1736 399 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 1 383 - -
Aed4g1736 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 78 90 IPR008271 GO:0004672|GO:0006468
Aed4g1736 399 Gene3D Phosphorylase Kinase; domain 1 1 44 - -
Aed4g1736 399 ProSiteProfiles Protein kinase domain profile. 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1736 399 SUPERFAMILY Protein kinase-like (PK-like) 2 229 IPR011009 -
Aed4g1736 399 CDD CIPK_C 252 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1736 Aed-Chr4 21731338 21732537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1736 1 381 CBL-interacting serine-threonine protein kinases AT5G10930 68.123 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aed4g1736 Pkinase 3.3e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1736 - - gmx:100817520 699.123