Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1735 ATGGAACCAACGTGCGTCGTCGACACTTCCCTCAACCTTAACGTTATTCCCTCTCCACACATCGACAAGCTCGCGGCAGAAGAAGTTATGGTTGAAGAGTTGCGGCGTCTAAACAGCGAGAACAAGAGGCTAACTGAGACGCTGAACCAGGTGTGCGAGAGCTACGTTGCTTTGCAGAAACATTTGAGTGAATTCAGCCAACTGAGGAGGAGTAACAGCGCAGCAGATCTTGATGATAAAGAATATTTATTAGGAACACCGTCGTCGAGGTCACTGAAGAAGAGAAAGGGCGAGATTGATGATCAGAATTGTGTGAATCTGTTCGAGTGCAGCACCATCACTACTGAGGAAGAAACAATATTCAAAAGGCCCAGGCAGCAAAGTACCTCGCCAAAGGTTTCCAAAGTTCTTGTACGGACTGATGCATCTGACACCGGCTTACTAGTACTAACTTGGGTTGATGGCCTGGTGTTGAAGTATGTGAGAGACGGATATCAGTGGAGAAAATACGGTCAAAAAGTCACCAGAGACAACCCTTCTCCTAGGGCTTACTTCAAGTGTTCCTATGCCCCAATCTGCCCAGTCAAGAAGAAGGTGCAAAGAAGTGTAGAAGATCCAAGTGTGTTGGTGACAACGTACGAAGGAGAGCACTACCATGGGCATGGGCAACAACATCATCATCATCAAAGTGCAGCAGAAATATCAGTGAATTCATCAAACCAGCAAATAAGTGATCAAACCCTAGCTAGTGCAGCAGCAGCAGCAGGTCCAATTGTAACGCTAGACTTGGTCCAGTCAAAAGTGGTTGACATTAATATTAATGCTCAAAACAAGTCATCATCTCTCCAGCAGTTTTTAGTTCAACAAATGGCTACTTCTTTGACTAGAGATCCTAATTTCACAGCCGCACTTGCTACTGCCATCTCTGGAAGAATTCTAGACGATCATACTTCTGTGGGAAAACGTTGA 969 0.453 MEPTCVVDTSLNLNVIPSPHIDKLAAEEVMVEELRRLNSENKRLTETLNQVCESYVALQKHLSEFSQLRRSNSAADLDDKEYLLGTPSSRSLKKRKGEIDDQNCVNLFECSTITTEEETIFKRPRQQSTSPKVSKVLVRTDASDTGLLVLTWVDGLVLKYVRDGYQWRKYGQKVTRDNPSPRAYFKCSYAPICPVKKKVQRSVEDPSVLVTTYEGEHYHGHGQQHHHHQSAAEISVNSSNQQISDQTLASAAAAAGPIVTLDLVQSKVVDININAQNKSSSLQQFLVQQMATSLTRDPNFTAALATAISGRILDDHTSVGKR 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1735 322 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 314 - -
Aed4g1735 322 Pfam WRKY DNA -binding domain 163 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g1735 322 SUPERFAMILY WRKY DNA-binding domain 159 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed4g1735 322 Gene3D WRKY domain 157 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed4g1735 322 ProSiteProfiles WRKY domain profile. 156 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g1735 322 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 314 IPR044810 GO:0003700
Aed4g1735 322 SMART WRKY_cls 161 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g1735 322 Coils Coil 27 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1735 Aed-Chr4 21707986 21709985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1735 6 317 WRKY Transcription Factor Family AT1G80840 41.317 2.73e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed4g1735 WRKY 1.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1735 - - gmx:100127373 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1246 6 17270436 17273157 Aed4g1735 4 21707986 21709985 PCT