LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed4g1729	ATGGCTGGTTGTTGTTCAAGCACTGCTCTTTTGTGCCTTTTCCTTTTCTTTGGATTCTCAGCAGCAGCTAAGGAATTACTAGTAGGAGGCAAAATAGATGCTTGGAAGATTCCATCTTCTGAATCAGATTCCCTCAATCAATGGGCTGAAAGGTCTCGTTTCAGAGTGGGCGATCATCTTGTGTGGAAATATGAGAGTGGAAAAGACTCAGTAATGGAAGTAACAAGGGAAGATTATGCAAATTGCAGCACCTCCAACCCCATAAAAGAGTACAGTGATGGGAGCACCAAGGTGAAGCTTGAGCGTCCTGGCCCATTCTTCTTCATCAGTGGAGCAAAGGGGCATTGTGAGAAGGGGCAAAAGTTGATTGTGGTGGTTATGTCTCCAAGGCACACATTCCCATCCATTGCCATTTCTCCTTCTCCAGCACCTTCCCCAGTAGAGTTCGAGGGTCCTGCTGTTGCTCCTACTAGCAGTGTCACAACGTTGCAAGTTGGCCTCGTCACTGCTTTGGGATTGTTGGCTATGAATGTGGGTTTTCGCATGTAA	549	0.4663	MAGCCSSTALLCLFLFFGFSAAAKELLVGGKIDAWKIPSSESDSLNQWAERSRFRVGDHLVWKYESGKDSVMEVTREDYANCSTSNPIKEYSDGSTKVKLERPGPFFFISGAKGHCEKGQKLIVVVMSPRHTFPSIAISPSPAPSPVEFEGPAVAPTSSVTTLQVGLVTALGLLAMNVGFRM	182

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed4g1729	182	Gene3D	-	22	131	IPR008972	-
	Aed4g1729	182	PANTHER	EARLY NODULIN-LIKE PROTEIN 3	7	175	-	-
	Aed4g1729	182	SUPERFAMILY	Cupredoxins	23	127	IPR008972	-
	Aed4g1729	182	CDD	OsENODL1_like	24	127	IPR041846	-
	Aed4g1729	182	ProSiteProfiles	Phytocyanin domain profile.	24	128	IPR003245	GO:0009055
	Aed4g1729	182	Pfam	Plastocyanin-like domain	35	120	IPR003245	GO:0009055
	Aed4g1729	182	PANTHER	BLUE COPPER PROTEIN	7	175	IPR039391	GO:0009055

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed4g1729	Aed-Chr4	21657433	21663923	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed4g1729	8	174	Phytocyanin Superfamily	AT4G31840	52.695	3.49e-61	186

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed4g1729	-		-	gmx:100305551	299.671

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed4g1729	4	21657433	21663923	Aed4g1729	4	21657433	21663923	ECH
	Aed6g1253	6	17341201	17344563	Aed4g1729	4	21657433	21663923	PCT