Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1725 ATGGGAATATATCTCAGCACTCCAAAAACTGAAAAGTTTTCTGAAGATGGTGAAAATGACCGTCTTAGATATGGTTTATCGTCCATGCAAGGGTGGCGTGCAACAATGGAAGATGCCCATGCTGCATATACTGATCTGGATGAGTCCACTTCATTTTTTGGTGTCTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCCAAGTTTCTTCACCAACAGGTGCTCAAAAGTGAGCCATACTTAACTGGAGATATAGGAACCTCCCTTCAGAAAGCCTTTTTAAGAATGGATGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTATCAATATTGGGGGATAAGATAAATAAGTTTACTGGGATGATAGAAGGGTTGATTTGGTCTCCACGAAGCAGTGATGGTAATTGCCAAGTTGATGATTGGGCTTTTGAGGAGGGGCCTCATTCTGATTTTGCTGGACCAACTTCGGGAAGCACAGCCTGTGTTGCAGTTATTAGAAACAATCAACTTGTTGTTGCAAATGCTGGTGATTCGCGATGTGTGATATCCCGGAAGGGCCAGGCATACAATTTGTCTAGAGACCACAAACCTGATCTTGAGATTGAGAAGGATCGAATCTTAAAAGCTGGTGGTTTTATTCACGCAGGACGGGTTAATGGAAGTTTAAATCTTGCAAGAGCTATTGGTGACATGGAATTTAAACAGAATAAGTTTCTTTCTGCTGAAAAACAAATTGTAACTGCCAATCCAGACATAAACACTGTTGAGCTTTGTGACGAAGATGAATTTGTGGTGTTAGCTTGTGATGGCATATGGGATTGCATGTCAAGTCAACAATTGGTAGATTTTGTTCATGAACAATTGCACTCGGAAACGAAACTTTCTGCAGTGTGTGAAAGAGTACTTGACCGGTGTTTGGCACCGTCGACTGCCGGTGGCGAGGGATGTGACAACATGACCATGATCGTGGTGCAGTTCAAAAGACGACCCGGTCAGTCCAGTGCACCAGCAGAAGAGCAATCCTCTTCAAAAGGACAAGCTGAACCTGAAACAAAACTAGAGAGAAGTGAAAGTTAG 1086 0.43 MGIYLSTPKTEKFSEDGENDRLRYGLSSMQGWRATMEDAHAAYTDLDESTSFFGVYDGHGGKVVAKFCAKFLHQQVLKSEPYLTGDIGTSLQKAFLRMDEMMRGQRGWRELSILGDKINKFTGMIEGLIWSPRSSDGNCQVDDWAFEEGPHSDFAGPTSGSTACVAVIRNNQLVVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKDRILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINTVELCDEDEFVVLACDGIWDCMSSQQLVDFVHEQLHSETKLSAVCERVLDRCLAPSTAGGEGCDNMTMIVVQFKRRPGQSSAPAEEQSSSKGQAEPETKLERSES 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1725 361 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Aed4g1725 361 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 341 - -
Aed4g1725 361 CDD PP2Cc 23 329 IPR001932 -
Aed4g1725 361 Pfam Protein phosphatase 2C 155 313 IPR001932 -
Aed4g1725 361 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Aed4g1725 361 PANTHER PROTEIN PHOSPHATASE 2C 1 341 IPR015655 GO:0004722|GO:0006470
Aed4g1725 361 SMART PP2C_SIG_2 28 329 IPR001932 -
Aed4g1725 361 Gene3D - 1 330 IPR036457 -
Aed4g1725 361 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Aed4g1725 361 SMART PP2C_4 13 327 IPR001932 -
Aed4g1725 361 MobiDBLite consensus disorder prediction 330 361 - -
Aed4g1725 361 SUPERFAMILY PP2C-like 3 331 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1725 Aed-Chr4 21624331 21629538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1725 1 343 PP2C-type Phosphatase Gene Family AT2G25070 76.385 0.0 579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1725 4 21624331 21629538 Aed4g1725 4 21624331 21629538 ECH
Aed6g1257 6 17358619 17363389 Aed4g1725 4 21624331 21629538 PCT