Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1714 ATGGGTTATATCAATTCAGCTTTGTCCTCTTCAAGCCAGGTTCATGCTGCAGAAGAAGCAATTGTCAGCGGCGGGGGTCTAAGTCACAATGGAAAATTCAGCTATGGGTATGCTAGCTCTCCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGATGGTGTTGGTGGCGAAATCGTTGGCCTTTTCGGAGTTTTTGATGGTCATGGTGGTGCTCGTGCTGCTGAGTATGTGAAGAAAAATCTGTTTAGTAATTTGATCAGTCACCCAAAATTCATTACTGACACCAAATTAGCAATAACTGATGCATATAATCATACCGACTCTGAGCTTCTGAAATCAGAGAATAGCCATAACAGAGATGCAGGATCAACTGCTTCCACTGCTATTTTAGTTGGTGACCGTTTGCTTGTTGCAAATGTTGGGGATTCCAGAGCTGTGATATGCAGGGGTGGTAATGCCATTGCTGTTTCTCGAGATCACAAGCCAGACCAAACTGATGAGAGGCAAAGGATTGAAGAAGCAGGAGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCCTAAAGCAATATGTCGTTGCTGATCCAGAAATTCAGGAAGAAAAAGTTGACAGCTCCCTTGAGTTTCTCATTCTGGCCAGTGATGGACTATGGGATGTTGTCACAAATGAGGAAGCTGTTGCTATGATTAAACCAATTGAGGATTCTGAGGAGGCATCAAAGAGGCTGATGCAAGAGGCATCAAAGAGAGGTAGTGCTGACAATATCACATGTGTTGTTGTTCGTTTCATGATGAACCAAGGTGGATCCAAAGAGGTAGCAGTAGCTTCTTCTCATAATAGTAGTAGCTCTGGTGGGGGCAAGAATCCTTCAGGTTTGAGTGACAGGTGA 942 0.4374 MGYINSALSSSSQVHAAEEAIVSGGGLSHNGKFSYGYASSPGKRSSMEDFYETRIDGVGGEIVGLFGVFDGHGGARAAEYVKKNLFSNLISHPKFITDTKLAITDAYNHTDSELLKSENSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEEAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVTNEEAVAMIKPIEDSEEASKRLMQEASKRGSADNITCVVVRFMMNQGGSKEVAVASSHNSSSSGGGKNPSGLSDR 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1714 313 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Aed4g1714 313 SMART PP2C_SIG_2 45 280 IPR001932 -
Aed4g1714 313 Gene3D - 26 285 IPR036457 -
Aed4g1714 313 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Aed4g1714 313 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 303 - -
Aed4g1714 313 Pfam Protein phosphatase 2C 63 273 IPR001932 -
Aed4g1714 313 SUPERFAMILY PP2C-like 28 280 IPR036457 -
Aed4g1714 313 SMART PP2C_4 24 278 IPR001932 -
Aed4g1714 313 CDD PP2Cc 33 280 IPR001932 -
Aed4g1714 313 PANTHER ALPHABET, ISOFORM E-RELATED 3 303 - -
Aed4g1714 313 MobiDBLite consensus disorder prediction 289 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1714 Aed-Chr4 21574957 21579522 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1714 1 286 PP2C-type Phosphatase Gene Family AT4G31750 88.112 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1714 K17506 - gmx:100797070 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1714 4 21574957 21579522 Aed4g1714 4 21574957 21579522 ECH