Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1712 ATGGCTTCCAAGCTCTGTGATTCTTGCAAATCCGCCACTGCTACCTTGTACTGCCGCCCTGACGCCGCGTTCCTCTGCGGCGCGTGTGACTCTAAGGTCCATGCCGCCAACAAGCTCGCGTCGCGCCACCCGCGCGTGGCTCTCTGCGAGGTGTGCGAGCAGGCGCCAGCGCACGTCACCTGCAAGGCCGACGCCGCCGCGCTCTGCCAAGCATGCGACCGTGACATCCACTCCGCCAACCCCCTCGCCAGCCGCCACGAGCGCGTCCCCGTTGCGCCCTTCTTCGAGTCCGTACACTCCGTCAAGGCCTCCTCGCCAATCAACTTCCTCGACGACCACCGCTTCTTCTCCGATGCCGACGCTGACGTCAGCACCGAGGAGGCCGAGGCCGCCTCCTGGCTGCTGCCTAATCCGAAGACAGATCTAAATTCCTCTCAGTACTTACTCTCCGAAACCGAACCTGTTCCGTACATAGATCTGGATTACGCCGCCGTGGATCCGAAAGCCGACCAGAAAAGCTCCGCCACCGCCGACGGCGTCGTTCCGGTTCAGAGCAACTTCGAGCCGTTCGCCTACTGTTACAAGTACAACGCCACTCTCTCACAATCACAGTCTCAGATGAGCCAGAGTGTATCTTCGTCGTCGATGGAGGTTGGAGTTGTGCCGGACGGGAACACGATGTCGGAGATATCGAACTGCAGCTACAGCAAGGTGGCGCCGGTGACGGCACAGTTCTCGGCGGCGGATAGGGAGGCTAGAGTGTTGAGGTACAGGGAGAAGAGGAAGAACAGAAAGTTCGAGAAGACGATTCGTTACGCATCGAGAAAAGCGTATGCGGAAACGAGGCCAAGGATCAAAGGCAGGTTCGCGAAACGCACTGATGGGGACCATCTGGCTGGATACGGCGTCGTTCCGTCGTGTTGA 924 0.5985 MASKLCDSCKSATATLYCRPDAAFLCGACDSKVHAANKLASRHPRVALCEVCEQAPAHVTCKADAAALCQACDRDIHSANPLASRHERVPVAPFFESVHSVKASSPINFLDDHRFFSDADADVSTEEAEAASWLLPNPKTDLNSSQYLLSETEPVPYIDLDYAAVDPKADQKSSATADGVVPVQSNFEPFAYCYKYNATLSQSQSQMSQSVSSSSMEVGVVPDGNTMSEISNCSYSKVAPVTAQFSAADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDGDHLAGYGVVPSC 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1712 307 Pfam B-box zinc finger 47 91 IPR000315 GO:0008270
Aed4g1712 307 Pfam B-box zinc finger 4 46 IPR000315 GO:0008270
Aed4g1712 307 Pfam CCT motif 250 292 IPR010402 GO:0005515
Aed4g1712 307 ProSiteProfiles Zinc finger B-box type profile. 1 48 IPR000315 GO:0008270
Aed4g1712 307 ProSiteProfiles CCT domain profile. 250 292 IPR010402 GO:0005515
Aed4g1712 307 CDD Bbox1_BBX-like 5 48 - -
Aed4g1712 307 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 2 306 IPR045281 GO:0009909
Aed4g1712 307 ProSiteProfiles Zinc finger B-box type profile. 44 91 IPR000315 GO:0008270
Aed4g1712 307 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 5 2 306 - -
Aed4g1712 307 SMART bboxneu5 49 91 IPR000315 GO:0008270
Aed4g1712 307 SMART bboxneu5 1 48 IPR000315 GO:0008270
Aed4g1712 307 CDD Bbox1_BBX-like 48 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1712 Aed-Chr4 21559153 21574856 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1712 1 306 C2C2-CO-like Transcription Factor Family AT5G24930 52.926 1.52e-110 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Aed4g1712 zf-B_box 3.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1712 - - gmx:100794431 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1712 4 21559153 21574856 Aed4g1712 4 21559153 21574856 ECH