Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1703 ATGGCTAGTGATCATTCTAACACTACTCACACCACCACCCCAATATCTTCTTCATCTTCTTCTAATAACAACAAGAACGACGATAAGGTATACAAAGGGGTGAGAAAGAGAAAGTGGGGGAAGTGGGTTTCTGAAATCAGGCTTCCGAATAGCCGTGAACGCATATGGCTAGGGTCTCATGACTCTCCTGAAAAGGCAGCACGAGCCTTCGATGCAGCACTTTACTGTCTACGTGGACGCCATGCCAATTTCAATTTCCCCAATACACCTTGCAACATGGACGGCATGACCAATGTGCCTCTAGCTGTGGCTCCTCTTACCCCACAAGAGATTCAAGAGGTTGCTTCTAAGTTTGCAAACCAGGTCCCAGCACAGCTACAAAAACCTCTTCATCATCATCATGATCAAGAAAAACAACAACAACAACCTCAACGTAGTTCTAGTACTACTACTGCCCCCACCACCACTGATGCCTCGTCATCATGTTCTACTACTGTGTATGAATGTGATGGAACGGTGCAAGTGGAGCATGGGGACATGGATTGGACATTCTTGAACGTGTTCGATTACTCCAATGAGCCAGATTATGATTATGATGATGATTAG 606 0.4538 MASDHSNTTHTTTPISSSSSSNNNKNDDKVYKGVRKRKWGKWVSEIRLPNSRERIWLGSHDSPEKAARAFDAALYCLRGRHANFNFPNTPCNMDGMTNVPLAVAPLTPQEIQEVASKFANQVPAQLQKPLHHHHDQEKQQQQPQRSSSTTTAPTTTDASSSCSTTVYECDGTVQVEHGDMDWTFLNVFDYSNEPDYDYDDD 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1703 201 MobiDBLite consensus disorder prediction 129 163 - -
Aed4g1703 201 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018 15 176 - -
Aed4g1703 201 Gene3D AP2/ERF domain 30 88 IPR036955 GO:0003700|GO:0006355
Aed4g1703 201 MobiDBLite consensus disorder prediction 141 163 - -
Aed4g1703 201 SUPERFAMILY DNA-binding domain 30 87 IPR016177 GO:0003677
Aed4g1703 201 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Aed4g1703 201 MobiDBLite consensus disorder prediction 1 32 - -
Aed4g1703 201 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 15 176 - -
Aed4g1703 201 MobiDBLite consensus disorder prediction 1 27 - -
Aed4g1703 201 CDD AP2 31 89 IPR001471 GO:0003700|GO:0006355
Aed4g1703 201 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Aed4g1703 201 Pfam AP2 domain 30 79 IPR001471 GO:0003700|GO:0006355
Aed4g1703 201 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Aed4g1703 201 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1703 Aed-Chr4 21486447 21487255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1703 15 120 AP2-EREBP Transcription Factor Family AT1G19210 64.151 1.78e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aed4g1703 AP2 3.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1703 - - gmx:100817386 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1703 4 21486447 21487255 Aed4g1703 4 21486447 21487255 ECH