Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1694 ATGATGCACATGACCTTCTACTGGAGCAGGAACGTGAATCTCCTAATCGATTCATGGAAGACCAACGATTGGACGGAGTATCTCCTCACTCTGGTCGCATGCCTGGTGGTTTCCGTTTTCTACCAGTTCCTCGAGAATCGCCGTATCCGCCTCAAGCTCATCGGCGCCGGAAAGCCCTTCCCGGAGGAGATCGAGACCCCGCTTCTGCGACGGAAGCTCGCTGGAAACAGTGCCAAGGTGGGCGTCAAGGTTGGCGGTGCGTTTCTGTTCGGGCTGAGCTCGGCGATCGGCTACTTGCTGATGTTATCGGTTATGTCCTTCAACGGAGGGGTCTTTGTTGCCATCGTCGTGGGTCTCGCTGTTGGTTACTTCTTCTTCAGAAACGAAGGCGAAGATTCTCTTGTAGTTGACACCTCTTGTGCCTGTGCTTAA 432 0.5394 MMHMTFYWSRNVNLLIDSWKTNDWTEYLLTLVACLVVSVFYQFLENRRIRLKLIGAGKPFPEEIETPLLRRKLAGNSAKVGVKVGGAFLFGLSSAIGYLLMLSVMSFNGGVFVAIVVGLAVGYFFFRNEGEDSLVVDTSCACA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1694 143 Pfam Ctr copper transporter family 4 126 IPR007274 GO:0005375|GO:0016021|GO:0035434
Aed4g1694 143 PANTHER COPPER TRANSPORTER 5.1-LIKE 1 143 - -
Aed4g1694 143 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 143 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1694 Aed-Chr4 21407118 21407549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1694 1 143 Inorganic Solute Cotransporters AT5G20650 47.260 5.69e-46 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1694 K14686 - gmx:100815028 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1694 4 21407118 21407549 Aed4g1694 4 21407118 21407549 ECH
Aed4g1694 4 21407118 21407549 Aed6g1225 6 17001328 17001771 ECH
Aed6g2162 6 23961800 23962246 Aed4g1694 4 21407118 21407549 ECH
Aed2g0391 2 2687510 2688031 Aed4g1694 4 21407118 21407549 ECH