Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1689 ATGCCAGAACCAACCATGAATCTACGCCACGGCACCAAGGTTTGGGTCCAAGACAGAGATTCCGCTTGGATTCCTGCTGAAATACTCGAATATTCGGGAAAGAATGTTACCGTTGCCACCGCTTCCGGCAAGAAGGTTGTTGCTCTTCCGGAGAACGTGTTTCCCAGGGATGCGGACGAAGAGGAGCTTGGTGGAGTCGAAGATATGACGAGGTTGGCTTACTTGAATGAGCCAGGGGTGTTGTACAATCTTCGGAGGAGATATACACTGAATGACATTTATACATATACAGGGAGCATTTTAATAGCTGTTAATCCATTCACAAAGCTTCCTCATTTGTATGATATCCATATGATGGAGCAGTATAAGGGAGCTCCGTTTGGTGAGCTTAGTCCACATGTATTTGCTGTTGCGGATGCATCTTATAGAGCAATGATGAATGGAGGTCAAAGCCAATCTATCTTGGTCAGCGGTGAAAGTGGTGCTGGGAAAACTGAGACAACAAAGTTGATTATGCAATATCTTACCTTTGTTGGAGGGCGTGCTGCTGGTGATGATAGAACAGTTGAACAACAAGTTCTTGAATCGAATCCACTTTTAGAGGCATTTGGCAATGCAAGGACTGTCAGAAATGACAATTCAAGCCGTTTTGGGAAGTTTGTTGAAATTCAATTTGATTCAAATGGTAGAATATCTGGTGCTGCAATTAGAACTTACTTACTAGAAAGATCACGGGTAGTGCAGATAACGGATCCAGAAAGAAATTATCACTGCTTTTATCAGTTGTGTGCATCTGAAAGGGATGCAGAGAAATATAAATTGGGACATCCAAGCCACTTCCACTATTTGAATCAAAGTAAAGTCTATGAATTAGATGGTGTAAGCAGTGCTGAAGAGTACATGAAGACAAGGAGAGCAATGGATATTGTTGGCATAAGTCATGAGGATCAGGAAGCCATATTTTGCACCTTAGCTGCAATTTTACATTTGGGAAACATTGAATTTTCTCCTGGAAAAGAGCATGACTCTTCAGTAATAAAAGATGAGGAATCAAGATTTCATTTGCAGATGGCTGCTAATCTTTTCAGGTGTGATTTGAACATACTGCTGGCAACATTATGTACCCGCTCAATACTAACCCGAGAAGGAAATATTGTGAAAGCTCTTGATTGTGATGCTGCTGTTGCTGGTCGGGATGCTTTGGCAAAAACTGTCTATGCTCGTTTATTTGATTGGCTTGTTGAGAAGATCAATCGTTCTGTTGGGCAAGATATCAATTCCCAGATGCAAATTGGAGTTTTGGATATATATGGTTTTGAGTGTTTTAAGGATAATAGTTTCGAGCAATTCTGCATCAATTTTGCAAATGAAAAGCTTCAACAACATTTTAATCAGCATGTTTTCAAGATGGAGCAGGAGGAATACAACAAAGAAGAAATCAACTGGAGTTACATCGAATTTATAGACAACCAAGATGTTTTAGATTTGATTGAAAAGAAACCCATTGGTATCATTGCTATGTTAGATGAAGCTTGGTTAGAAAAGGAGAAGTTTTCAGAAACAGATTTTACCCTTTCTCATTATGCTGGAAAGGTCACTTACCATACAGAAACTTTCTTAGACAAAAATCGTGATTATGTAATCGTAGAACATTGTAATCTATTGTCCTCTTCAAAATGCCCTTTTGTGTCGGCTCTTTTTCCTTTGCTAACAGAGGAATCTTCAAGGTCATCATACAAGTTTTCTTCTGTTGCACTCAGATTTAAGCAACAACTTCAAGCGCTCATGGAAACGCTTAACACAACAGAGCCACATTACATTCGATGTGTCAAGCCAAATTCTTTGAATCGACCACAAAAGTTTGAGAATACTAGTGTCATACACCAATTGCGCTGTGGGGGTGTCCTTGAGGCTGTTAGAATAAGTCTGGCAGGTTACCCCACTCGAAGGATTTACTCAGAGTTTGTAGATCGCTTTGGATTAATAGCTCCAGAATTTATGGATGGAAGTTATGATGATAAAGCTGTAACTCTGAAAATCTTGCAAAAGCTAAAGCTTGAGAATTTTCAGTTAGGTAGGACCAAAGTATTTCTCAGGGCTGGCCAAATTTGCATTTTAGACTCTAGACGTGCAGAAGTTTTGGACAATGCTGCAAAGTGTATTCAGCGGCGACTTCGAACATTTATTGCACGCAGGGATTTCATCTCAATCCAATCTGCTGCTCTTTCTCTTCAAGCATGCTGCAGGGGATCCATTGGCCGAAAGATATATGCTTCTAAACGGGAGACATCGGCAGCTATCTCGATTCAGAAATATATCCGTATGTGTCTGATGAGGCATGCTTATGTGAAATTATGTTATTCTGCTATTATTGTGCAATCCAATGTTCGTGGTTTCACAACTCGTCAAAGGTTCTTGCACAGAAAAGAACACAAAGCTGCCACTTCTATTCAGGAGGCTAATGAAGCTGGAGCGTTGCGTTTAGCAAAGAATAAACTTGAGAAACAATTGGAAGAGCTTACATGGCGTTTGCATCTTGAGAAAAAAATAAGGGTTTCTAATGAAGAGGCTAAGCATGTTGAGATTTCCAAACTACAGAAGATGGTAGATGCTATGAATCTTGAATTAGATGCTGCTAAACTTGCAACAATTAATGAGTGCAACAAAAATGCAGTTTTGCAAAATCAGTTGCAATTGTCAGTAAAGGAAAAATCTGCTTTAGAAAGAGAGCTAGTCGCAATGGCTGAAGTGCGAAAGGAAAATGCTCTATTAAAGGGTTCATTGGATGCTTTTGAAAAGAAGAGCACAGCTTTGGAGCTTGAGCTTGTGATTGCTCAGAAAGACCATGATCAAACCATTCAGAAAATGAGGGAGTTTGAAGATAAGTGTTCTCAACTTGGGCAAAATGTTAAAAGTCTTGAGGAAAAACTATCGAGTTTAGAGGATGAAAATAATGTGCTTCGTCAGAAAGCCTTAAGTGTATCTCCTAAGAGTAACCATCGAGGTTTCACAAAGTCATTATCCGAAGAATCGCCCACACCTACAAAACTTATTCCCCATTTTACAGTTAGCAGCTTGTCAGATTCCCGTCGACCAAAATTAACCGCAGAGAGGCACCAGGATAACTATGAACTCCTCTCTAGGTGTATCAAAGAGGATTTGGGATTCAAAAATGGTAAACCTCTGGCAGCTAGTATCATATACAAATGTCTTCACCATTGGCATGCCTTTGAATCTGAGCGCACAGGCATATTTGATTACATAGTTGATGGAATTAATGATGTCCTTAAGGTTAGAGATGATGACATTTTGCCATATTGGCTGTCTAATACATCTGCACTTCTATGCCTCTTGCAAAGGAACTTGCATTCTAATGGTTTCTTAAAGGCCACTGCTCAACGTTTTGCTAGATCATCTGGCTTGACCAGCCGAATAGGGAATGGACTGAGGTCTCCATTGAAGCTTATTGGATATGATGATAGTACGTCACATGTGGAGGCAAAATATCCAGCTATTCTTTTTAAACAACAACTAACTGCTTGTTTAGAGAAGATTTTTGGCCTTATTCGTGATAATTTGAAAAAGGAGCTGTCTCCACTTCTGGGATCATGCATTCAGGGGATGGTTGAGGCAGGGAGAGATGCCTTGGTTTTGCCTAGTGATTTTTCATCTTCCATTTTGGAACCAGTTTTACCCATTACTCGCATTGATGATTTTACTGCTTTCAGTGCTTTTGAGATTGTTGTCTTTCAACAGTTACTATATATTTTTCCTTATTTTGAGATTCTTTTGTCAGCACCTAAATCAGGTCGAGTACAAGGTGGAAAATCATCTAGATCTCCTGGTGGGCTTCCTCAACAATCACATGTTGCTCAATGGGACAACATCATCAAGTTTTTGGATTCACTCATGAGCCGCTTATCCGCAAATCATGTGATACATCAGAAAAGGAAAAAATCTTTGGAAGAAATTCGGCAGGATCTTTGTCCGGCATTGACTGTGAGGCAAATTTATCGAATCAGTACTATGTACTGGGATGACAAGTATGGAACCCAGAGTGTGTCCAACGAGGCAATTAGTGAGATGAGGGAAATTGTGAGCAAGGACAATCAGAGTTTGACCTCTAATTCATTCTTGTTGGATGATGATATGAGCATTCCCTTTTCTGCTGAAGACATAGATATGGCAATCCCTGCTATAAATACTGATGATATTGATCTTCCAGCATTTTTGTGTGAATATCCCTGTGCCCAGTTTCTTATTTTACATGAGAAGTAA 4278 0.3978 MPEPTMNLRHGTKVWVQDRDSAWIPAEILEYSGKNVTVATASGKKVVALPENVFPRDADEEELGGVEDMTRLAYLNEPGVLYNLRRRYTLNDIYTYTGSILIAVNPFTKLPHLYDIHMMEQYKGAPFGELSPHVFAVADASYRAMMNGGQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASERDAEKYKLGHPSHFHYLNQSKVYELDGVSSAEEYMKTRRAMDIVGISHEDQEAIFCTLAAILHLGNIEFSPGKEHDSSVIKDEESRFHLQMAANLFRCDLNILLATLCTRSILTREGNIVKALDCDAAVAGRDALAKTVYARLFDWLVEKINRSVGQDINSQMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNQHVFKMEQEEYNKEEINWSYIEFIDNQDVLDLIEKKPIGIIAMLDEAWLEKEKFSETDFTLSHYAGKVTYHTETFLDKNRDYVIVEHCNLLSSSKCPFVSALFPLLTEESSRSSYKFSSVALRFKQQLQALMETLNTTEPHYIRCVKPNSLNRPQKFENTSVIHQLRCGGVLEAVRISLAGYPTRRIYSEFVDRFGLIAPEFMDGSYDDKAVTLKILQKLKLENFQLGRTKVFLRAGQICILDSRRAEVLDNAAKCIQRRLRTFIARRDFISIQSAALSLQACCRGSIGRKIYASKRETSAAISIQKYIRMCLMRHAYVKLCYSAIIVQSNVRGFTTRQRFLHRKEHKAATSIQEANEAGALRLAKNKLEKQLEELTWRLHLEKKIRVSNEEAKHVEISKLQKMVDAMNLELDAAKLATINECNKNAVLQNQLQLSVKEKSALERELVAMAEVRKENALLKGSLDAFEKKSTALELELVIAQKDHDQTIQKMREFEDKCSQLGQNVKSLEEKLSSLEDENNVLRQKALSVSPKSNHRGFTKSLSEESPTPTKLIPHFTVSSLSDSRRPKLTAERHQDNYELLSRCIKEDLGFKNGKPLAASIIYKCLHHWHAFESERTGIFDYIVDGINDVLKVRDDDILPYWLSNTSALLCLLQRNLHSNGFLKATAQRFARSSGLTSRIGNGLRSPLKLIGYDDSTSHVEAKYPAILFKQQLTACLEKIFGLIRDNLKKELSPLLGSCIQGMVEAGRDALVLPSDFSSSILEPVLPITRIDDFTAFSAFEIVVFQQLLYIFPYFEILLSAPKSGRVQGGKSSRSPGGLPQQSHVAQWDNIIKFLDSLMSRLSANHVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEAISEMREIVSKDNQSLTSNSFLLDDDMSIPFSAEDIDMAIPAINTDDIDLPAFLCEYPCAQFLILHEK 1425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1689 1425 SMART MYSc_2a 58 712 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed4g1689 1425 Gene3D - 254 308 - -
Aed4g1689 1425 ProSiteProfiles IQ motif profile. 787 814 IPR000048 GO:0005515
Aed4g1689 1425 ProSiteProfiles Myosin motor domain profile. 64 711 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed4g1689 1425 Pfam Myosin N-terminal SH3-like domain 11 48 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aed4g1689 1425 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 9 58 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aed4g1689 1425 Coils Coil 956 990 - -
Aed4g1689 1425 PANTHER MYOSIN 8 818 - -
Aed4g1689 1425 PANTHER MYOSIN 1312 1422 - -
Aed4g1689 1425 Coils Coil 862 882 - -
Aed4g1689 1425 PANTHER PROTEIN OPAQUE1-LIKE 1256 1312 - -
Aed4g1689 1425 SMART iq_5 784 806 IPR000048 GO:0005515
Aed4g1689 1425 SMART iq_5 761 783 IPR000048 GO:0005515
Aed4g1689 1425 SMART iq_5 713 735 IPR000048 GO:0005515
Aed4g1689 1425 SMART iq_5 736 758 IPR000048 GO:0005515
Aed4g1689 1425 CDD MYSc_Myo11 78 699 IPR036018 -
Aed4g1689 1425 MobiDBLite consensus disorder prediction 994 1015 - -
Aed4g1689 1425 Pfam IQ calmodulin-binding motif 716 734 IPR000048 GO:0005515
Aed4g1689 1425 Pfam IQ calmodulin-binding motif 763 782 IPR000048 GO:0005515
Aed4g1689 1425 Pfam IQ calmodulin-binding motif 788 805 IPR000048 GO:0005515
Aed4g1689 1425 Gene3D Myosin VI head, motor domain, U50 subdomain 309 420 - -
Aed4g1689 1425 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 761 809 IPR027417 -
Aed4g1689 1425 Pfam Myosin head (motor domain) 66 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed4g1689 1425 Pfam Myosin head (motor domain) 516 699 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed4g1689 1425 ProSiteProfiles Dilute domain profile. 1086 1368 IPR002710 -
Aed4g1689 1425 Gene3D - 713 763 - -
Aed4g1689 1425 Gene3D - 764 816 - -
Aed4g1689 1425 Gene3D Kinesin motor domain 64 645 IPR036961 -
Aed4g1689 1425 PANTHER PROTEIN OPAQUE1-LIKE 1312 1422 - -
Aed4g1689 1425 Coils Coil 890 910 - -
Aed4g1689 1425 Gene3D - 442 602 - -
Aed4g1689 1425 PRINTS Myosin heavy chain signature 94 113 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed4g1689 1425 PRINTS Myosin heavy chain signature 151 176 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed4g1689 1425 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed4g1689 1425 PRINTS Myosin heavy chain signature 198 225 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed4g1689 1425 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed4g1689 1425 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 758 IPR027417 -
Aed4g1689 1425 Gene3D - 646 712 - -
Aed4g1689 1425 Coils Coil 823 850 - -
Aed4g1689 1425 PANTHER PROTEIN OPAQUE1-LIKE 8 818 - -
Aed4g1689 1425 PANTHER PROTEIN OPAQUE1-LIKE 819 1209 - -
Aed4g1689 1425 PANTHER MYOSIN 819 1209 - -
Aed4g1689 1425 Coils Coil 914 948 - -
Aed4g1689 1425 PANTHER MYOSIN 1256 1312 - -
Aed4g1689 1425 ProSiteProfiles IQ motif profile. 737 766 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1689 Aed-Chr4 21360098 21381685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1689 6 1421 Myosins gene family AT4G33200 64.375 0.0 1894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1689 K10357 - gmx:100796413 2393.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1689 4 21360098 21381685 Aed4g1689 4 21360098 21381685 ECH
Aed6g1289 6 17663892 17692159 Aed4g1689 4 21360098 21381685 PCT