Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1677 ATGAATCTAAGTGAGAGCCCAGCTCGTACTGATCAACAGAAAAACCTGTCTCGTCAATCATCAAAGTCAAACCGGAGTAGTGGATGCTGTCGAGGCTTGAGCAGCGTTAGGACTGTGTCATCCACCGCCCCAACCTTGCAACACCATCAGCTTCAGCTCCAGCAGCGTTATGAAAAATTGGAACTCAAGGTGGCAGGTTTGGAAAAAGAAGTGCAAAGGCAGACAGAACTGCGAGTCATGTATAGGAAAAGAATGGAGAGAACACAAGATTACTTAAAATACTGTCTCCAAATAGCACAGCAAAATGGTATCTTGGACCTCATTATCCACGACTCCAAAGCTTCTCATCATGAACTCTCACTCTCACTATCACAATCTGATCCCCTCTCTCTATACACTCCTCAAATTCCCACTACTCCTCCTTCCCACTACCACCCCAATCTAAAGCCCATCATTGATCAAGCCAAAATCAATGGATGGTTTATTAACCCAAACGAGATTGAGTTGGGAGAGAAAATAGGGCAGGGAACGACGGCAGACATTCACAGAGGGACATGGCGTGGATTTGACGTAGCGGTGAAGTGCATGTCCGCCGCATTCTTCCGCACAAACGAAAACGGCGTCGTATTCTTCGCTCAGGAGCTTGAAACCCTGGCAAGGCAGCGCCACAGATTTGTGCTTCGGCTCATGGGAACATACGTGTATATGGCACCTGAGGTAATCAAATGTGAGCCCTATAATGAAAAATGTGATGTATACAGTTTTGGAATCATACTCAACGAGCTACTTACTGGAAAATACCCTTATATTGAGACAGAATTTGGTCCTGCCAAGGGGAAGCTAAGGCCTATGCTTCCGTCAAGGGACGATGGTGACCAAGTGGGAGAGTTGATTGACCTGATAAGCCTTTGTTGGAATGGAAATCCATCCACTCGACCATCCTTTGCAACAATTAGTCATACCCTCAAAAGCTATGCCAATAGGGTCATCCAAATTTCTAGTTAG 1005 0.4577 MNLSESPARTDQQKNLSRQSSKSNRSSGCCRGLSSVRTVSSTAPTLQHHQLQLQQRYEKLELKVAGLEKEVQRQTELRVMYRKRMERTQDYLKYCLQIAQQNGILDLIIHDSKASHHELSLSLSQSDPLSLYTPQIPTTPPSHYHPNLKPIIDQAKINGWFINPNEIELGEKIGQGTTADIHRGTWRGFDVAVKCMSAAFFRTNENGVVFFAQELETLARQRHRFVLRLMGTYVYMAPEVIKCEPYNEKCDVYSFGIILNELLTGKYPYIETEFGPAKGKLRPMLPSRDDGDQVGELIDLISLCWNGNPSTRPSFATISHTLKSYANRVIQISS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1677 334 ProSitePatterns Protein kinases ATP-binding region signature. 173 194 IPR017441 GO:0005524
Aed4g1677 334 Pfam Protein tyrosine and serine/threonine kinase 234 322 IPR001245 GO:0004672|GO:0006468
Aed4g1677 334 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 230 329 - -
Aed4g1677 334 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 16 231 - -
Aed4g1677 334 MobiDBLite consensus disorder prediction 1 33 - -
Aed4g1677 334 SUPERFAMILY Protein kinase-like (PK-like) 165 318 IPR011009 -
Aed4g1677 334 PANTHER OS09G0443600 PROTEIN 230 329 - -
Aed4g1677 334 PANTHER OS09G0443600 PROTEIN 16 231 - -
Aed4g1677 334 Coils Coil 50 77 - -
Aed4g1677 334 Gene3D Transferase(Phosphotransferase) domain 1 232 333 - -
Aed4g1677 334 ProSiteProfiles Protein kinase domain profile. 1 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1677 334 Gene3D Transferase(Phosphotransferase) domain 1 147 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1677 Aed-Chr4 21287967 21289838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1677 230 325 MAP Kinase Kinase Kinase AT1G62400 44.554 1.62e-18 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Aed4g1677 PK_Tyr_Ser-Thr 2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1677 - - gmx:100810435 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1677 4 21287967 21289838 Aed4g1677 4 21287967 21289838 ECH