Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1671 ATGTCTTTCACATTTTGTATCATTGTTAACTTCCAATCACCAATCGATTGTAGCGGTGTTATCTCTTTGGTGCCGCTACTAACACCACCACAGTACTCATTTTCCCATCTTGTGGATAACTATATCAAACCAGACCCCGCATTTGTCTATTTACCCATACTTAACAACCAATTACAAACTACTGAACAACAACAACAAGGTCATGTTTCTTTGGCATATCACTACTCCTCCATGCAATACTGCAATGATAATTTCACCAATAGTGAAGGAGGACTATTGGGGCCTTCTTCCAAGAATAATAATAATAATAAGCGCAAAGAAGAATCAACTAGTCATCACATTGAAACGGGTGGTGCATCCAATATTAATCTCCTACAGAATCCGTCATTGCCAATTGGGAATTATATCAAAATGGGTCCTCGTAATTGGCCTCCTATACCAAGGCCATTGTTTTGCACTTGCTGCAAAGTGCTCCGACAAACTATTCACACTAATGGTTCTGATTTTGAGAGACTAGAGATTCACGGAAGGATCGGGCTTATTAGCCATATCATAATTCAGAATCAGAGTATTACACTCGATGATCGTTCATGCGACAATTATCAAATGATTGATTTCAACAACAAAAGCACCATAGAAGTTAAAAGTTTCCTACGAGATTACATTGAGCGGAAGGGTAAATTAGGGTACATTATTGCGGAAGATGCTTTTTCTGCCTTTTATGAAGCCCTCTACACTGGATTTGATTGGGTTGGAAAACTCCCTAATAACAATGTTAGCCAAGACGATGATTTGATTTCACAAAATGTGGAGGAAGAGCCTGAACCCGAGCCTAAGACTAGAAAGCCAAAGCCTAAACGTAGTTGCAAAGAACAGAGTGAGAGAATGAAAATGATAACATTGAAAGATTTGAGTAGTGTATTTCATATGACTATTAAGAAGGCTGCAGAGGATGTATTGGACATATCTGTCAGAGGACTCAAGTCAATTTGTCGCAGGCTTTGTTTAGATAGTTGGCCCCAAAGACAGTTGCAACCCCTTACGAGAAGGTTGAAAGTGTTGAAAGTAGCAATGGATTCGGATGATAAAGGGATAAAAGATGCAGCACGCATAGAAATTCAATTAATTAAGCAAGAAATGATGCAGTTGTGTCATGGAGTGACCCCGACCGGTATAGATATTCCTAATTTGCCTGAAAATTAA 1203 0.389 MSFTFCIIVNFQSPIDCSGVISLVPLLTPPQYSFSHLVDNYIKPDPAFVYLPILNNQLQTTEQQQQGHVSLAYHYSSMQYCNDNFTNSEGGLLGPSSKNNNNNKRKEESTSHHIETGGASNINLLQNPSLPIGNYIKMGPRNWPPIPRPLFCTCCKVLRQTIHTNGSDFERLEIHGRIGLISHIIIQNQSITLDDRSCDNYQMIDFNNKSTIEVKSFLRDYIERKGKLGYIIAEDAFSAFYEALYTGFDWVGKLPNNNVSQDDDLISQNVEEEPEPEPKTRKPKPKRSCKEQSERMKMITLKDLSSVFHMTIKKAAEDVLDISVRGLKSICRRLCLDSWPQRQLQPLTRRLKVLKVAMDSDDKGIKDAARIEIQLIKQEMMQLCHGVTPTGIDIPNLPEN 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1671 400 MobiDBLite consensus disorder prediction 272 292 - -
Aed4g1671 400 ProSiteProfiles RWP-RK domain profile. 280 368 IPR003035 -
Aed4g1671 400 MobiDBLite consensus disorder prediction 91 118 - -
Aed4g1671 400 PANTHER RWP-RK DOMAIN PROTEIN 28 386 - -
Aed4g1671 400 Pfam RWP-RK domain 299 345 IPR003035 -
Aed4g1671 400 PANTHER PROTEIN RKD4 28 386 IPR044607 GO:0003700
Aed4g1671 400 MobiDBLite consensus disorder prediction 267 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1671 Aed-Chr4 21248865 21250585 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1671 255 360 NLP Transcription Factor Family AT1G64530 29.730 7.22e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Aed4g1671 RWP-RK 3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1671 - - gmx:102665948 360.918