Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1670 ATGAGTTTGGGAAGCGCGAAGGAGGAATCGGGTTCGGAAATCCACATCCCAGGCGAAATCGACTGGCACATGCTTGACAAGTCCAAGTTCTTCTTCCTCGGCGCCGCCCTATTCTCCGGCGTCTCATTCGCACTCTACCCCATGGTCGTGTTGAAGACGCGCCAACAAGTTTCCTCGTCACGCTTCTCATGCTTCAACATCTCCTGTGCCATTCTCCGCCACGAGGGCCTCCGCGGCTTCTACAAAGGCTTTGGCACTTCCCTCATGGGCACCGTCCCCGCGCGTGCCCTCTACATGGCTTCCCTCGAAGTCACCAAGAGCAACGTCGCCACCGCCTTCCTCGACCTCGGCTTCTCCGAGACCACCGCCGTCGCCGTCGCCAACGCTGCCGCGGGTGTCACCTCCGCCATGGCCGCGCAGCTCGTCTGGACCCCGATCGACGTCGTCAGTCAACGCCTCATGGTTCAGGGCAGCGCCGGCGGAGGGTCTCAAACCGCCGTGCTCGCGAATCTCAATTCCCAGAGTTACAGAAACGGTTTCGACGCTTTTAGAAAAATCATGTGCGCCGATGGAGCAAGAGGGTTTTACAGAGGGTTTGGGATTTCGATTTTGACCTACGCGCCTTCCAATGCGGTTTGGTGGACTTCTTATTCTATGGTGCATAGACTCATTTGGGGTGCTTACAATGAAAAGATTAATAATAATAGTAATAATTTGCAGGGTTTAGGGTTTAGGGCTTCTCAGACGATGGTGGCGGTTCAGGGGTTGAGTGCGGTTATGGCTAGTGGGGTATCTGCGATTGTGACAATGCCGTTTGATACGATCAAGACAAGGTTACAGGTTTTGGATAGTACCACCGAAGAGAATGGGAGAAGAAAGCCTTTGACTTTTGTTCAGACAGTGAGGAATTTGGTGAAAGAAGGTGGCTTGCTTGCTTGTTACAGAGGATTGGGTCCGAGATGGGCTTCCATGTCCATGTCTGCCACAACTATGATTACTACTTATGAGTTCTTGAAACGAATGTCTACCAAGACTCAAGAGGATTTTACTCCATCTTAG 1059 0.526 MSLGSAKEESGSEIHIPGEIDWHMLDKSKFFFLGAALFSGVSFALYPMVVLKTRQQVSSSRFSCFNISCAILRHEGLRGFYKGFGTSLMGTVPARALYMASLEVTKSNVATAFLDLGFSETTAVAVANAAAGVTSAMAAQLVWTPIDVVSQRLMVQGSAGGGSQTAVLANLNSQSYRNGFDAFRKIMCADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRLIWGAYNEKINNNSNNLQGLGFRASQTMVAVQGLSAVMASGVSAIVTMPFDTIKTRLQVLDSTTEENGRRKPLTFVQTVRNLVKEGGLLACYRGLGPRWASMSMSATTMITTYEFLKRMSTKTQEDFTPS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1670 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 223 IPR018108 -
Aed4g1670 352 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 348 - -
Aed4g1670 352 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Aed4g1670 352 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Aed4g1670 352 Pfam Mitochondrial carrier protein 35 109 IPR018108 -
Aed4g1670 352 Pfam Mitochondrial carrier protein 126 225 IPR018108 -
Aed4g1670 352 Pfam Mitochondrial carrier protein 251 344 IPR018108 -
Aed4g1670 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Aed4g1670 352 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 348 - -
Aed4g1670 352 Gene3D Mitochondrial carrier domain 27 350 IPR023395 -
Aed4g1670 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 341 IPR018108 -
Aed4g1670 352 SUPERFAMILY Mitochondrial carrier 23 338 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1670 Aed-Chr4 21244370 21245428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1670 1 347 Chloroplast and Mitochondria Gene Families AT5G26200 64.225 2.35e-160 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1670 K15121 - gmx:100798870 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1670 4 21244370 21245428 Aed4g1670 4 21244370 21245428 ECH
Aed4g1670 4 21244370 21245428 Aed6g1278 6 17498999 17501315 ECH