Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1667 ATGACAGATAAAAATCCAAGACCACCTGATTCACCTGACGATGATATCTCCGAGTACTTGAATTTTGATGATGATCAATGGCCAGATGATGACCCGGATTCATTTGCTTCCGGGCATATCCTCAGCCATAACAATCAAGCCAATGAGTTTATTAACTTTGAAGAGTCTTCTAGCAGTAAGCCAAGAGACGTTGGCAATGAACGTGAGAAGAAGGAAGCCACGGATAGAGTTTCATTCAAAACAAAGTCAGAGTTCAAACACAACTTAAGAACATCTGATTACAGGAACTACTATAGGTGTTCAGTGGACGGATGTAAGGTCAAAAAGAGAGTTGAAAGAGATAGGGATGATCCAAGCTATGTAATAACAACCTACGAAGGCATCCACACTCACCCGAGTTATAGCTAA 408 0.4093 MTDKNPRPPDSPDDDISEYLNFDDDQWPDDDPDSFASGHILSHNNQANEFINFEESSSSKPRDVGNEREKKEATDRVSFKTKSEFKHNLRTSDYRNYYRCSVDGCKVKKRVERDRDDPSYVITTYEGIHTHPSYS 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1667 135 MobiDBLite consensus disorder prediction 1 40 - -
Aed4g1667 135 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 94 133 IPR044810 GO:0003700
Aed4g1667 135 MobiDBLite consensus disorder prediction 53 77 - -
Aed4g1667 135 SUPERFAMILY WRKY DNA-binding domain 91 133 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed4g1667 135 Pfam WRKY DNA -binding domain 90 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g1667 135 MobiDBLite consensus disorder prediction 16 31 - -
Aed4g1667 135 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 16 85 - -
Aed4g1667 135 MobiDBLite consensus disorder prediction 60 77 - -
Aed4g1667 135 ProSiteProfiles WRKY domain profile. 95 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g1667 135 Gene3D WRKY domain 58 133 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed4g1667 135 SMART WRKY_cls 86 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g1667 135 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 94 133 - -
Aed4g1667 135 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 16 85 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1667 Aed-Chr4 21234178 21234958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1667 1 133 WRKY Transcription Factor Family AT5G26170 36.842 1.78e-21 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed4g1667 WRKY 2.6e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1667 - - gmx:100819462 177.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1667 4 21234178 21234958 Aed4g1667 4 21234178 21234958 ECH