Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1663 ATGGAGGATCTCGAGGAGGAAGAGAAGGGAGCGGAGGAGGTGTTGGGATCAAGCTTGACCATGGAGAAGGTGGCGGCGGCCAAGAAGTTCATTGAGAATCACTATAGGTCTCAGATGAAGAACATCCAAGAGAGGAAGGAGAGGCGTTGGGTTTTAGAAAGGAAATTGGCATCGTCGGATGTGCCAAATGAGGAGCGGATTAACCTCATCAAAGATTTAGAGAGGAAGGAGACTGAATATATGCGATTGAAAAGGCACAAGATTTGTGTTGATGATTTTGAACTTTTGACCATCATTGGAAGGGGGGCTTTTGGGGAGGTTAGACTGTGTCGGGAGAAGAAATCTGGAAATATTTATGCTATGAAAAAGCTGAAGAAATCTGAAATGCTTAGGAGAGGCCAGGTGGAACATGTTAGAGCTGAGAGGAACTTGCTGGCCGAAGTTGCCAGCCATTGCATTGTGAAACTTTACTACTCATTTCAGGATGCTGAGTACTTGTATTTAATTATGGAGTATCTGCCTGGGGGTGACATTATGACTCTGCTGATGAGGGAAGACACCTTAAGTGAAAATGTTGCTAGATTTTACATGGCACAAAGTGTTATGGCCATAGAATCTATTCACAAACACAGTTACATTCACAGAGATATTAAACCCGATAACCTTCTTCTGGATAAAAATGGTCACATGAAGCTCTCTGATTTTGGTCTCTGTAAGCCTCTCGATTGTATTGCCTTGTCTACACTGCATGAAAATCAGACCATGGATGATGAAACTTTGGCAGAACCAATGGATGTTGATGATGCGGACAATCGGAGCAGCTGGAGGAGTCCACGTGAACAGCTTCAACATTGGCAGATGAACAGGAGGAAGTTGGCATTTTCAACAGTGGGGACACCAGACTACATTGCTCCTGAAGTACTTTTGAAAAAAGGATATGGGATGGAATGTGATTGGTGGTCACTGGGAGCAATAATGTATGAAATGCTGGTTGGTTACCCTCCATTTTACTCCGATGACCCAATAACCACATGCAGAAAGATTGTTCATTGGAGAAATCATTTAAGATTTCCAGATGATGCCCAGTTAACACTTGAGGCTAAGGATCTAATTTATAGGTTGCTATGTGATGTTGATCATAGGCTAGGTACTCGAGGGGCCAATGAAATAAAGGCTCATCCTTGGTTCAAGGGTGTAGAGTGGGATAAACTGTATGAAATGGAGGCAGCATTTAAACCTCAAGTCAACGGGGAGCTGGATACCCAAAACTTTATGAAGTTTGATGAGGTAGATCCACCATCAGTGGCAAGAACTGGGTCTGGATCCTCACGAAAGATGCTAACTACCAAAGATCTAAGCTTCGTTGGTTACACTTACAAGAACTTCGATGCTGTAAAGGAAGGGCTTCGTCAATCTTTTGGTGATTCCATGCAAGAATATGCTTCTAAACGGGCAGCTGAAGAAACAAGTTTACAAATGCTTGCGTCCTCTGGAGATCCCATGGAACTGAGAGTTGTGCGACTGAGTGCTCCTGTCCTGGCTGCCCAGAAACTTCCCCCTTCTCTTGCATTTCCCTAA 1578 0.4379 MEDLEEEEKGAEEVLGSSLTMEKVAAAKKFIENHYRSQMKNIQERKERRWVLERKLASSDVPNEERINLIKDLERKETEYMRLKRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLRRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDIMTLLMREDTLSENVARFYMAQSVMAIESIHKHSYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCIALSTLHENQTMDDETLAEPMDVDDADNRSSWRSPREQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWRNHLRFPDDAQLTLEAKDLIYRLLCDVDHRLGTRGANEIKAHPWFKGVEWDKLYEMEAAFKPQVNGELDTQNFMKFDEVDPPSVARTGSGSSRKMLTTKDLSFVGYTYKNFDAVKEGLRQSFGDSMQEYASKRAAEETSLQMLASSGDPMELRVVRLSAPVLAAQKLPPSLAFP 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1663 525 Gene3D Transferase(Phosphotransferase) domain 1 179 413 - -
Aed4g1663 525 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Aed4g1663 525 CDD STKc_NDR_like 91 460 - -
Aed4g1663 525 SMART serkin_6 93 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1663 525 SUPERFAMILY Protein kinase-like (PK-like) 76 447 IPR011009 -
Aed4g1663 525 Gene3D Phosphorylase Kinase; domain 1 84 178 - -
Aed4g1663 525 ProSiteProfiles AGC-kinase C-terminal domain profile. 397 469 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aed4g1663 525 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 488 - -
Aed4g1663 525 SMART pkinase_C_6 397 461 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aed4g1663 525 Pfam Protein kinase C terminal domain 415 459 IPR017892 GO:0004674|GO:0005524|GO:0006468
Aed4g1663 525 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 13 488 - -
Aed4g1663 525 ProSiteProfiles Protein kinase domain profile. 93 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1663 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Aed4g1663 525 Pfam Protein kinase domain 288 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1663 525 Pfam Protein kinase domain 94 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1663 Aed-Chr4 21204477 21218830 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1663 1 501 AGC Kinase Gene Family AT4G33080 79.764 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Aed4g1663 Pkinase 5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1663 K08790 - gmx:100815717 989.949