Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1661 ATGGAGGAGATGTCAACCACGGTTGCAGTGCCATTGAGAGTAGGTAATTCTGTGTGTGATAAGCCAACCATAACTACCCAGATGGATGTATCCAGAATTAAGCTGATGGCAGATGCAGGGTTGTTATCCAATTCTATAACTAAGGTTTCCAATGAGGAAACTTTTATAGGTTCAGACGAGGATCATGATGGTGGTCGTCATGAGGATGAAGTTAGTATTACAGCAGTCACAGCTCCAGAACAGGAAAGAGAAGGAGAAATTCCGACGCCGGATATGATATCCCAAAATATAAACTCTTTGGTTGTTGGTGATGAAATTTTAACCCCAGAAATTGAGGAGGATGATTTGATATCGTTGGAAGGTGATCCAATTATTGATAGCTCTCCACTTTCAGTAGCCAGTGAGAACAGTAGTGTTTGTGGAGATGAGTTCATCAGTTCTGAGGTTTCTTCAGATTTAGGGACAACAAGTTCCATAGACATAGGGAAGAGGATCTCCACTGTCAAAATTGCAGCCAGGGCTTCTGATTTGGGTGCGTCAAATGTAGAGGCAGATGTAGCAGCGAGCCTTGAAGAGACAGGAGTTAGATCTGGCCCAACGCCCACAATAGGTGTTTTTCATCAACTAACTCTAGAAAGATCTGTGAGTGGAACAGTTGGTAAAAGTGTTTTTGAATTAGATTGTACCCCACTATGGGGATTTACATCTGTGTGTGGAAAAAGGCCTGAGATGGAAGATGCACTTGCAACTGTACCTCGATTTCTGAAAATTCCTATTGAAATGCTAACTGGTGATAGGCTACCTGATGGAATAAACAAATGTTTCAGTCAGCAGACAATACATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTGGCAAATTATTGCCGTGAGCGCATGCATTTGGCCTTGGCTGAGGAAATAGAATCTGTCAAGGAGGAAGGTCTATTAGTTGAAAATATCAAGGATGATTGTCGAGATCTGTGGAAAAAAGTTTTCACCAATTGTTTTTTGAAGGTTGATGCTGAAGTTGGTGGGGAAGTTGTTAATCATGAGCCTGTTGCCCCAGAAACTGTTGGATCCACTTCTGTTGTTGCTATTATCTGTTCATCTCATATCATAGTTTCAAACTGTGGTGATTCAAGAGCGGTTCTGTGTCGTGGCAAAGAACCCATGCCACTATCTGTTGATCATAAACCAAATCGAGATGATGAATATGCAAGAATTGAGGCTGCTGGAGGCAAGGTGATACAATGGAATGGTCACCGAGTATTTGGTGTTCTAGCAATGTCAAGGTCTATTGGTGATAGGTATTTGAAGCCATGGATTATTCCGGACCCTGAGGTGACGTTTCTTCCTCGTACAAAAGATGATGAATGCCTCATTCTGGCCAGTGATGGCCTGTGGGATGTCATGACCAACGAAGAGGTGTGTGACATTGCTCGGCGTCGCATACTTCTCTGGCACAAGAAAAATGGCCTGGCACTGTCCTCGGGGAGGGGAGAGGGAATTGATCCTGCTGCACAAGCAGCTGCGGAGTACCTATCAAACCGTGCTCTTCAGAAAGGAAGTAAAGACAACATCACTGTGATTGTGGTGGATTTGAAAGCTCAAAGAAAATTTAAGAGCAAGACATGA 1644 0.4337 MEEMSTTVAVPLRVGNSVCDKPTITTQMDVSRIKLMADAGLLSNSITKVSNEETFIGSDEDHDGGRHEDEVSITAVTAPEQEREGEIPTPDMISQNINSLVVGDEILTPEIEEDDLISLEGDPIIDSSPLSVASENSSVCGDEFISSEVSSDLGTTSSIDIGKRISTVKIAARASDLGASNVEADVAASLEETGVRSGPTPTIGVFHQLTLERSVSGTVGKSVFELDCTPLWGFTSVCGKRPEMEDALATVPRFLKIPIEMLTGDRLPDGINKCFSQQTIHFFGVYDGHGGSQVANYCRERMHLALAEEIESVKEEGLLVENIKDDCRDLWKKVFTNCFLKVDAEVGGEVVNHEPVAPETVGSTSVVAIICSSHIIVSNCGDSRAVLCRGKEPMPLSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPDPEVTFLPRTKDDECLILASDGLWDVMTNEEVCDIARRRILLWHKKNGLALSSGRGEGIDPAAQAAAEYLSNRALQKGSKDNITVIVVDLKAQRKFKSKT 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1661 547 ProSitePatterns PPM-type phosphatase domain signature. 282 290 IPR000222 GO:0043169
Aed4g1661 547 SUPERFAMILY PP2C-like 228 538 IPR036457 -
Aed4g1661 547 Pfam Protein phosphatase 2C 260 530 IPR001932 -
Aed4g1661 547 CDD PP2Cc 233 537 IPR001932 -
Aed4g1661 547 Gene3D - 218 547 IPR036457 -
Aed4g1661 547 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 122 547 - -
Aed4g1661 547 SMART PP2C_4 221 535 IPR001932 -
Aed4g1661 547 ProSiteProfiles PPM-type phosphatase domain profile. 231 537 IPR001932 -
Aed4g1661 547 PANTHER ALPHABET, ISOFORM E-RELATED 122 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1661 Aed-Chr4 21196195 21202818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1661 1 547 PP2C-type Phosphatase Gene Family AT1G17550 47.425 2.23e-160 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1661 K14497 - gmx:100803321 985.711