Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1657 ATGTCTTGTCAACAGCCATGTGCCGCCCCCGTTCAAAATATCACGATGGTGGCTGTTGACAAAGACAAAAACAGTGCAAACGCTTTCCGTTGGGCCGTTAATCACCTAGACAACCCCCTCATCATTGCCGTCCATGTCAAGAACAAAAACTTTTCTCATAATGTGACGAATGTGTTCCCACCAGACGAGGAGGATGTAGCCACTATTTTCAATACCTTGCGTGGATTGTGTACCCGCAAAGCTGTTACGATGAAAGAAGCCGTAATCGATGATAGTGATGTTGTGAGAGGACTTCTAGAGTTTGCAAACAGGAATGCCATACATAGTATCGTGGTCGGTGCATCCGCCAAAAACCCTTTGACAAGTCTCAAAAAGTTTAAAGCCTATCAGTATCAGGATATACCAACAGCCATGGTAAAATCAGCCCCAGATTACTGCTCTGTGTACGTAATTTCCAAATTGAAGATTGTGTCAGCTCGATCAGCAGTACGGTCAGTGTCAAAAAAATTTATAGCATCGAAACAACCTCCTTGTGAAACAGAAGGTGGATCAGTGAGGGGACAGCCACCTAGGAGTAGGGGCACATACGAAGGACAAACAGAACAAATGAGAATACAGGCACGTGAGAGACCAAGGAGTGCGGGTAGTATGTCAATAGACATTAACATTGATGTACACACTCATCCACGACATTGGTCAATGGATGAAAGAGAAATTGCAGGGCTTGTGGCCGTGGATGTGAAACAAGATCCTGATGTAGCAGATTCTCCCGGGACACCATCTCAATCCTCAAGTGAGCTTGAAGCCGAGATGAAAAGATTGAGGCTTGAACTGAAGCAAACTATGGACATGTACAGCTCAGCTTGCAAGCAAGCAATCTCAGCCAAAAATCAGGCAGAACAGATTCGTCAATGGAAAGTGGAAGAGGATCGGAAGGTTGAGGTAGTTAGGATGTCTCAAGAGGCAGCTCTTGCACTGGCAGAAAGAGAGAAAGCTAGAGCCAAAGCTGCATTGGAAGCAGCTGAGGAAGCCAGGAGGAGAGCTGAACAGGAAGCACAGAGAAGAAAGGATGTAGAGATGAAGGCCAGAATAGAGGCAGAAGAGAAGGAACGAGCGTTATCTATTGAGGTACTAAGCTGCATTAGACATCCGCACATGGTGCTCCTCCTTGGCGCGTGTCCTGAGCATGGGTGCTTGGTGTATGAATACCTGGATTATGGTAGCTTAGAAGATAGATTATTCAGAAAAAATAACAGCAGGCCAATTTCATGGAAGAAACGGTTCCAAATAGCTGCTGAGATTGCAACTGCACTCCTCTTCTTACACCAAAACAAGCCAGAGCCTATTGTGCACCGAGACCTTAAACCAGCAAACATTCTCTTGGACAGGAACTTTGTGAGTAAAATCAGTGATGTTGGTCTGGCACGGTTAGTTCCTGCTTCTGTAGCTGATACTGTGACACAACATTACATGACTTCCGCTGCTGGAACCTTTTGTTACATTGATCCTGAGTATCAACAAACTGGAATGCTAACAACAAGGTCAGATGTGTATTCACTGGGGATATTGCTAATGCAGATAATCACAGCCAAGCCTCCAATGGGACTTGCTCATATACTTAGGAAGGCAATTGAAAAGGGTAGGTTTGAAGAGATTCTTGACCCTGTGATCACTGATTGGCCAGTGGAAGAGGCTCTATCATTTGCCAAATTAGCATTGAAGTGTGCAGAACTCAGCAAGAAGGACAGGCCAAATCTTGCAACAGTTGTGTTGCCAGAGCTTACCAGGTTAAGTGAACTTGAAGTTGAATGTACTTCACACATTGATCGTGTTTCTTTTAGCAGTGATGATATGAAATCTAGCTATGCCTCACACCCTCCTCCCACACCTCCAAGAAGTCTATACTCTGACTCAGATATGCTCTTTAGGACCTAG 1935 0.4491 MSCQQPCAAPVQNITMVAVDKDKNSANAFRWAVNHLDNPLIIAVHVKNKNFSHNVTNVFPPDEEDVATIFNTLRGLCTRKAVTMKEAVIDDSDVVRGLLEFANRNAIHSIVVGASAKNPLTSLKKFKAYQYQDIPTAMVKSAPDYCSVYVISKLKIVSARSAVRSVSKKFIASKQPPCETEGGSVRGQPPRSRGTYEGQTEQMRIQARERPRSAGSMSIDINIDVHTHPRHWSMDEREIAGLVAVDVKQDPDVADSPGTPSQSSSELEAEMKRLRLELKQTMDMYSSACKQAISAKNQAEQIRQWKVEEDRKVEVVRMSQEAALALAEREKARAKAALEAAEEARRRAEQEAQRRKDVEMKARIEAEEKERALSIEVLSCIRHPHMVLLLGACPEHGCLVYEYLDYGSLEDRLFRKNNSRPISWKKRFQIAAEIATALLFLHQNKPEPIVHRDLKPANILLDRNFVSKISDVGLARLVPASVADTVTQHYMTSAAGTFCYIDPEYQQTGMLTTRSDVYSLGILLMQIITAKPPMGLAHILRKAIEKGRFEEILDPVITDWPVEEALSFAKLALKCAELSKKDRPNLATVVLPELTRLSELEVECTSHIDRVSFSSDDMKSSYASHPPPTPPRSLYSDSDMLFRT 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1657 644 Gene3D Transferase(Phosphotransferase) domain 1 405 615 - -
Aed4g1657 644 Pfam Protein kinase domain 347 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1657 644 Gene3D HUPs 9 140 IPR014729 -
Aed4g1657 644 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 375 614 - -
Aed4g1657 644 SUPERFAMILY Protein kinase-like (PK-like) 372 629 IPR011009 -
Aed4g1657 644 ProSiteProfiles Protein kinase domain profile. 327 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1657 644 Coils Coil 317 361 - -
Aed4g1657 644 Pfam Universal stress protein family 16 121 IPR006016 -
Aed4g1657 644 SMART serkin_6 343 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1657 644 MobiDBLite consensus disorder prediction 616 644 - -
Aed4g1657 644 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 14 374 - -
Aed4g1657 644 Gene3D Phosphorylase Kinase; domain 1 346 404 - -
Aed4g1657 644 MobiDBLite consensus disorder prediction 172 216 - -
Aed4g1657 644 PANTHER OS02G0152300 PROTEIN 14 374 - -
Aed4g1657 644 PANTHER OS02G0152300 PROTEIN 375 614 - -
Aed4g1657 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Aed4g1657 644 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 122 - -
Aed4g1657 644 CDD STK_N 17 153 - -
Aed4g1657 644 Coils Coil 264 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1657 Aed-Chr4 21172781 21177083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1657 84 600 Receptor kinase-like Gene Family AT5G12000 47.049 8.95e-170 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Aed4g1657 Pkinase 9.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1657 - - gmx:100798861 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1657 4 21172781 21177083 Aed4g1657 4 21172781 21177083 ECH