Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1655 ATGGCATATATTCTAAAGTTCCAACTACATCGAAATCCATCCATTGAAATAAGAAAAGCATTCCAATACCAACCCTCTCCGGCGCCTTCTCTGTTACGACGTCGTCTCTTAGTCACCGCCACAACCCTTCGAGTTTCGAAAACCCTAACCCCACAATCCCCATTCACAAACCCATTTGCAATCATGGCTGGGGTGGCACCAGAAGGATCACAATTCGATGCTCGTCAATATGATGCTAAGATGAATGAGTTACTTGGAACCGAGGGGCAAGCTTTTTTTACTTCTTATGATGAAGTTTGCGAAAGCTTTGATGCTATGGGATTGCAGGAGAACCTTCTGAGGGGTATTTATGCATACGGTTTTGAGAAGCCTTCTGCAATTCAGCAAAGGGGGATTGTTCCTTTCTGCAAGGGGCTTGATGTAATTCAGCAAGCACAATCTGGAACTGGAAAAACTGCTACGTTTTGTTCTGGAGTTTTGCAGCAGCTTGATTACAGCTTAGTTGAATGCCAGGCACTGGTTCTTGCTCCCACTCGGGAGCTTGCACAACAAATTGAGAAGGTCATGCGAGCACTGGGGGACTATCTTGGTGTCAAGGTTCATGCTTGTGTTGGTGGGACCATTGTTCGTGAAGATCAGCGTATCCTCTCAAGTGGGGTTCATGTTGTTGTTGGTACTCCTGGTCGTGTATTCGACATGCTGCGTAGGCAATCTTTGCGCCCTGATAACATCAAGATGTTTGTACTGGATGAGGCAGACGAGATGCTCTCTCGAGATCTATGA 783 0.461 MAYILKFQLHRNPSIEIRKAFQYQPSPAPSLLRRRLLVTATTLRVSKTLTPQSPFTNPFAIMAGVAPEGSQFDARQYDAKMNELLGTEGQAFFTSYDEVCESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTIVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSRDL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1655 260 Gene3D - 74 260 IPR027417 -
Aed4g1655 260 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 132 260 IPR014001 -
Aed4g1655 260 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 67 258 - -
Aed4g1655 260 SMART ultradead3 120 260 IPR014001 -
Aed4g1655 260 Pfam DEAD/DEAH box helicase 126 258 IPR011545 GO:0003676|GO:0005524
Aed4g1655 260 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 248 256 IPR000629 -
Aed4g1655 260 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 101 129 IPR014014 GO:0003724
Aed4g1655 260 PANTHER - 67 258 - -
Aed4g1655 260 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 258 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1655 Aed-Chr4 21156384 21159806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1655 62 258 Eukaryotic Initiation Factors Gene Family AT3G13920 89.899 3.30e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1655 K03257 - gmx:100806638 380.948