Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1645 ATGAGCGCAGCGGATGATGACCCAGAAAGAGAAAGTAGGAGAAGATTGAAAAGAGGTAAAGAAGAGAAAGCGTTGTTGAGTTGTGACGGTGTGAAAAATTTCCAGCGCGATTTGATGGCTGGGGCGTTGATGGGTGGTGTGGTGCACACGATTGTGGCCCCAATTGAGAGGGCGAAGCTATTGTTGCAGACCCAAGAAAGCAATTTGGCGATTGTGGCGAAGGGGCGTCGCAGATTCAAGGGCATGGTCGATTGCATAGCCCGTACGGTCAGGGAAGAAGGCATTCTCTCTTTGTGGCGAGGCAATGGCAGCAGTGTTATTCGTTACTATCCTTCTGTCGCTCTCAATTTCTCTCTCAAGGATCTATACAAAAGCATGTTAAGAGGTGAAAACTCTCGTGACAATCTTTTGCCAGGTGCCGCTGCTAATTTTGCTGCGGGGGCTGCAGCTGGCTGTACAACGCTTGTGTTGATATACCCCCTTGACATAGCACACACACGCCTTGCTGCTGACATTGGAAGGACAGAAGTGCGCCAATTTCGAGGAATTCACCATTTCTTGGCTACCATATTCCACAGGGACGGCATTCAGGGGATCTACAGGGGCCTTCCTGCGTCTTTACAAGGGATGGTGGTACACAGGGGCCTTTATTTTGGAGGCTTTGATTCCATGAAAGAGATCATGTCTGCAGAATCAAAACCCGAGTTGGCATTGTGGAAGCGTTGGATGGTAGCTCAGGCAGTCACAACCTCTGCCGGGTTGATATCTTATCCGTTAGACACAGTTCGTAGGAGGATGATGATGCAGTCTGGCTTGGAACAGCCAGTGTACAATAGCACCTGGGACTGCTGGAGGAAGATCTATAGGACAGAAGGGGTGGCTTCATTTTACCGTGGTGCAGTTTCTAATGTGTTTAGGAGCACAGGAGCAGCAGCTATCTTAGTCTTGTATGATGAGGTTAAGAAATTTATGAATTGGAGGAGATTTTAA 990 0.4848 MSAADDDPERESRRRLKRGKEEKALLSCDGVKNFQRDLMAGALMGGVVHTIVAPIERAKLLLQTQESNLAIVAKGRRRFKGMVDCIARTVREEGILSLWRGNGSSVIRYYPSVALNFSLKDLYKSMLRGENSRDNLLPGAAANFAAGAAAGCTTLVLIYPLDIAHTRLAADIGRTEVRQFRGIHHFLATIFHRDGIQGIYRGLPASLQGMVVHRGLYFGGFDSMKEIMSAESKPELALWKRWMVAQAVTTSAGLISYPLDTVRRRMMMQSGLEQPVYNSTWDCWRKIYRTEGVASFYRGAVSNVFRSTGAAAILVLYDEVKKFMNWRRF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1645 329 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 30 328 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aed4g1645 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 240 323 IPR018108 -
Aed4g1645 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 32 126 IPR018108 -
Aed4g1645 329 PRINTS Mitochondrial carrier protein signature 200 218 IPR002067 GO:0055085
Aed4g1645 329 PRINTS Mitochondrial carrier protein signature 245 267 IPR002067 GO:0055085
Aed4g1645 329 PRINTS Mitochondrial carrier protein signature 37 50 IPR002067 GO:0055085
Aed4g1645 329 PRINTS Mitochondrial carrier protein signature 50 64 IPR002067 GO:0055085
Aed4g1645 329 PRINTS Mitochondrial carrier protein signature 101 121 IPR002067 GO:0055085
Aed4g1645 329 PRINTS Mitochondrial carrier protein signature 153 171 IPR002067 GO:0055085
Aed4g1645 329 PANTHER ADP,ATP CARRIER PROTEIN-RELATED 30 328 - -
Aed4g1645 329 SUPERFAMILY Mitochondrial carrier 31 319 IPR023395 -
Aed4g1645 329 Gene3D Mitochondrial carrier domain 36 329 IPR023395 -
Aed4g1645 329 PRINTS Adenine nucleotide translocator signature 138 151 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aed4g1645 329 PRINTS Adenine nucleotide translocator signature 112 124 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aed4g1645 329 PRINTS Adenine nucleotide translocator signature 241 257 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aed4g1645 329 PRINTS Adenine nucleotide translocator signature 79 100 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aed4g1645 329 PRINTS Adenine nucleotide translocator signature 34 46 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aed4g1645 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 138 227 IPR018108 -
Aed4g1645 329 Pfam Mitochondrial carrier protein 237 325 IPR018108 -
Aed4g1645 329 Pfam Mitochondrial carrier protein 33 129 IPR018108 -
Aed4g1645 329 Pfam Mitochondrial carrier protein 140 229 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1645 Aed-Chr4 21080538 21084551 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1645 30 321 Antiporters AT5G13490 41.216 6.06e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1645 K05863 - gmx:100797251 555.829