Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1638 ATGCCCTGCGCAGCTTCATCCACCTCTCCATTCTCTTCACTCTCTTTTTCTTCTTTCTTTATTTATACTACTATTATTCAATTCCACTTTCTCTCAAGCCTCCTCCTCACTCCCATGATTTTTATCGAGGATCTCTGGCCACTGCTCCAGCAACTCGTTGGAAAAATTTCTTTCTTCTCATCAGATAATTCGTCCTTCTTCCAAAACCTTGGGGAATCGATGACGAACTCAAGCTGCGGAGGCGCGGAGTTGGAGCTATGCCGAGATGAATCAGCCGCATTGGTTCTGAAGTTTGTGGCCATTGCCTCCATTCTCCTCTCCGGCATGGCCGGAATCGCCATCCCGCTCATTGGAAAACACCGCCGCTTCCTCCGCACCGACGGAAACCTCTTCGTGGCGGCCAAGGCCTTCGCCGCCGGGGTGATTCTCGCGACCGGATTCGTCCACATGCTCTCCGACGCAACCGAAGCGCTTAACCACCCGTGCTTGCCGTCGTTCCCGTGGTCGAAGTTTCCCTTCACGGGATTCTTCGCCATGCTGGCCGCGCTCTTCACGCTCCTTCTCGATTTCCTGGGAACGCAGTACTACGAGCGCAAGCAAGGGCTGAATCGCTCCGTGGAAGAGCAAGTACGGGTCGGGTCATCCGAACCCGGAACGAAGGTGTTTGGAGAAGAAGAAAGCGGCGGAATGCACATCGTGGGGATGCATGCACATGCGGCGCATCATAGACATAACCATGATCATGGCAATGATTCATGTGATGGCACTGGGAACGTGAAGGAACATGCCCACGGACACGGACACGGACACGGCCACTCCCATATTGAAGAAACTGATGTTCGACACGTGGTCGTTTCTCAGGTGTTGGAGCTTGGGATTGTATCACATTCGGTTATAATAGGGTTGTCCCTGGGGATATCTCAAAGTCCTTGTACAATAAGGCCTTTAATTGCGGCGTTATCGTTTCATCAGTTTTTTGAAGGGTTTGCGCTAGGAGGGTGCATTTCCCAAGCGCAGTTCAAAGCCTCATCGGCATCCATAATGGCTTGTTTTTTTGCACTGACTACACCGCTGGGTGTTGGGATTGGAACCGCGATATCTTCGGGGTTTAACCCTTACAGTCCAGGTGCACTCATAACCGAAGGCATCTTGGATTCGTTGTCGTCGGGAATACTGGTGTATATGGCATTGGTAGATTTGATAGCTGCGGATTTTCTAAGCAAGAGGATGAGTTGTAACTTTAGGCTTCAGATAGCGTCTTACTGCATGCTTTTCCTTGGGGCTGGATTGATGTCTTCGCTCGCAATTTGGGCCTGA 1317 0.5118 MPCAASSTSPFSSLSFSSFFIYTTIIQFHFLSSLLLTPMIFIEDLWPLLQQLVGKISFFSSDNSSFFQNLGESMTNSSCGGAELELCRDESAALVLKFVAIASILLSGMAGIAIPLIGKHRRFLRTDGNLFVAAKAFAAGVILATGFVHMLSDATEALNHPCLPSFPWSKFPFTGFFAMLAALFTLLLDFLGTQYYERKQGLNRSVEEQVRVGSSEPGTKVFGEEESGGMHIVGMHAHAAHHRHNHDHGNDSCDGTGNVKEHAHGHGHGHGHSHIEETDVRHVVVSQVLELGIVSHSVIIGLSLGISQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFKASSASIMACFFALTTPLGVGIGTAISSGFNPYSPGALITEGILDSLSSGILVYMALVDLIAADFLSKRMSCNFRLQIASYCMLFLGAGLMSSLAIWA 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1638 438 MobiDBLite consensus disorder prediction 244 273 - -
Aed4g1638 438 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 74 438 - -
Aed4g1638 438 Pfam ZIP Zinc transporter 96 435 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Aed4g1638 438 TIGRFAM zip: ZIP zinc/iron transport family 82 438 IPR004698 GO:0005385|GO:0016021|GO:0071577
Aed4g1638 438 PANTHER ZINC/IRON TRANSPORTER 74 438 - -
Aed4g1638 438 MobiDBLite consensus disorder prediction 243 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1638 Aed-Chr4 21043835 21045491 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1638 70 438 Inorganic Solute Cotransporters AT1G10970 70.976 4.36e-179 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1638 K14709 - gmx:100812212 676.781