Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1637 ATGGGAATAGCAAGGAAATGTTCATATTGTGGTAACTTAGGTCACAATGCAAGGACTTGTAAAAGTACTACTCTCAGTCAAGGACAACTAAAGCTCTTCGGAGTGCAACTTGCACTAGCAGGTGTTTCTTCTTCATATAATTCTGCCATGAAAAGAAGTTACAGCACCAACTACTTGTTGTCTTCTTCATGGGCCTCTAATTCCTCTGTACCCTCCTTTTCCTCACCTTCCCTGCTTTCTGCAGATGAAAATTATTCAGATAGTTACTTACTCAATGCCAATAGCCTCATATCAACAATTCAAGACACAAACAAAGGTTTGGCGTGGACAGAGGAGGAGCATCGAATATTTCTGATAGGGCTTGAGAAGCTGGGGAAGGGAAACTGGAGAGGCATATCTAAAAGTTTTGTGACAACAAGAACACCCATTCAAGTGGCTAGTCATGCACAAAAATATTTTATGCGTCAATCTCAGAATAGTTTCAATAAAAGATCAAAACACCACCGTTCCAGCCTTTTCGATAATAATAATAATAATACTTGGCTTTCGCATCCTCATTCAAGTTCAACTAATACTGGCATTGTTCAGAGGGCGGTCCCAGATTTAGAACTCAAACTTGCAACTCCCACGCCATTGGATGCATGCTCTGCACGCCTTTTAAGCTGA 666 0.4084 MGIARKCSYCGNLGHNARTCKSTTLSQGQLKLFGVQLALAGVSSSYNSAMKRSYSTNYLLSSSWASNSSVPSFSSPSLLSADENYSDSYLLNANSLISTIQDTNKGLAWTEEEHRIFLIGLEKLGKGNWRGISKSFVTTRTPIQVASHAQKYFMRQSQNSFNKRSKHHRSSLFDNNNNNTWLSHPHSSSTNTGIVQRAVPDLELKLATPTPLDACSARLLS 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1637 221 MobiDBLite consensus disorder prediction 164 192 - -
Aed4g1637 221 PANTHER TRANSCRIPTION FACTOR KUA1 4 181 - -
Aed4g1637 221 SUPERFAMILY Homeodomain-like 103 157 IPR009057 -
Aed4g1637 221 CDD SANT 108 153 IPR001005 -
Aed4g1637 221 Pfam Myb-like DNA-binding domain 108 153 IPR001005 -
Aed4g1637 221 Gene3D - 109 158 - -
Aed4g1637 221 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 157 IPR017930 -
Aed4g1637 221 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 4 181 - -
Aed4g1637 221 ProSiteProfiles Myb-like domain profile. 109 153 IPR001005 -
Aed4g1637 221 SMART sant 105 155 IPR001005 -
Aed4g1637 221 MobiDBLite consensus disorder prediction 172 192 - -
Aed4g1637 221 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 104 156 IPR006447 GO:0003677
Aed4g1637 221 ProSiteProfiles Zinc finger CCHC-type profile. 5 22 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1637 Aed-Chr4 21040672 21041762 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed4g1637 Myb_DNA-binding 3.5e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1637 - - gmx:100806176 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1637 4 21040672 21041762 Aed4g1637 4 21040672 21041762 ECH