Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1610 ATGGGTGGTCTTGAAATGACAGTTAGTTCTACTGTGTCTATGGCTAATCCTTTTCTTGTTTCTTCTGCTTGGGAACCATTTGTTCCATTGAGTCAGACTCAGAGTGAGTTTGCCAATTCAGCTTACCCTTTTGTTCTTGAAAACCAGGGAATGAACTGTGACGACTCTCACTTTGTTCAATATATATCTGACTCAAATTTTGAGCACATGCCATTATTTAAGGTTCCCTCCTTTGGCCAAACTGGTTTTTATGATATAGATAACTATCTGCTGCCAAATCATAATCCGAGTAATGAGTCTGGAATAAAAAATGAGCAATCTCAGCATGAAGGTTCAACTTCTGAAGAAGGAGCAGCTGCACCTGGTGAACATAAAAGAAAGCGAGGACTTTACTATAATTTTACTTTCAGTTCAAATAAGAATGCTGAGGGGGAAACACTTAAAGATTCTTCTGTGAAACAACAATGTGAAAAGAAACAAAAAGTTACACAAAATAATACTGCTGCTAACTTGAGTGGAAAGCAATTGCTGAAGCACAAGAAAGATATTGACTCCGAAAGTGGAGAAGCTCTCAAAGAAAATTTCATTCATGTGAGAGCCAGAAGAGGCCAAGCTACAAACAGTCACAGCCTTGCAGAAAGGGTAAGGAGAGAAAAGATTAGTGAGCGAATGAGGTTGCTTCAAGAACTTGTTCCAGGATGCGACAAGATAACGGGTAAAGCGTTTCTGTCCATGAAACTTGCAACTGTAAACCCAGAATTGAATTTTAATGTAGAGCAGATCCGCTCCAAAGATTCACGCATTGGACCTATGGGTGGATATGGTGCCCAGGGACGCATGCCTAGCCCATCAACACAATTCCCTCCAATGCCACAGTCTGCTTTGAACCAAAGCTTTTATGGAAAAAGTTACAATTTCAGTACAGCACTTGACAATTTGGAAACCAGTGGATGGTTGAAAACAGAGTTGTAG 972 0.4012 MGGLEMTVSSTVSMANPFLVSSAWEPFVPLSQTQSEFANSAYPFVLENQGMNCDDSHFVQYISDSNFEHMPLFKVPSFGQTGFYDIDNYLLPNHNPSNESGIKNEQSQHEGSTSEEGAAAPGEHKRKRGLYYNFTFSSNKNAEGETLKDSSVKQQCEKKQKVTQNNTAANLSGKQLLKHKKDIDSESGEALKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCDKITGKAFLSMKLATVNPELNFNVEQIRSKDSRIGPMGGYGAQGRMPSPSTQFPPMPQSALNQSFYGKSYNFSTALDNLETSGWLKTEL 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1610 323 MobiDBLite consensus disorder prediction 95 114 - -
Aed4g1610 323 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 202 241 IPR036638 GO:0046983
Aed4g1610 323 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 204 264 IPR011598 GO:0046983
Aed4g1610 323 MobiDBLite consensus disorder prediction 95 124 - -
Aed4g1610 323 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 7 323 - -
Aed4g1610 323 Gene3D - 196 250 IPR036638 GO:0046983
Aed4g1610 323 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 7 323 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1610 Aed-Chr4 20843624 20845985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1610 15 323 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 39.031 5.33e-46 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1610 - - gmx:100787749 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1610 4 20843624 20845985 Aed4g1610 4 20843624 20845985 ECH