Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1597 ATGGCATCGCACAATGGTCTTGTTGTGATTGTTTTTGTGTTGCTGATTTCATCAAAGCTTGCTGCAACATCTCACAACATAGTGCGGTTCCTACCCGGCTTCCAGGGACCCCTTCCTTTTCTACTTGAAACTGGTTACGTGGAAGTGGGTGAAAGTGAAGCAGAAGCAGAAGTCTTCTACTATTTTATTGAGTCGGAGAACGATCCTAAAGAGGACCCTATCCTTCTTTGGCTAACGGGTGGCCCTGGTTGCTCTGCATTCTCTGGCCTTGTAAGTAGCATTATATTTGTGGATCTGCCTGTTGGTACAGGCTTCTCTTATCCCAAAACAGAACGTGCTGTTCACCAAGGTACCACCAAGCTAGTTCGAAATGCTCATCAATTTCTTAGGAAGTGGCTAATTGATCATCCGGAATTTCTCTCTAATGAAGTGTACATTGCTGGAGACTCATACTGCGGCATTCCTGTCCCAGTTATTGTTCAAGAAATTTTAAACGGAAACGAAGGTGGTATGCAACCAAGCATAAATATCCAGGGATACCTGCTGGGAAATCCCGTAACAACAGCAACTGAAAAAAACTACGAAATACCATTTAATCATGGCATGGCACTAATTTCTGATGAACTCTACGAGGTCTCTTGGAGAAGGTCTCTTGCTCAAAAAACCTCAGCGTTTTTCAGAACTCCTATCACATTGCCACCGTTATACTGTCGGTCTCATGTGTATGTCCTCTGTACCTTTTGGGCCAATGATGGTAATGTTCGCAAAGCACTGCATATTCGGAAAGGAAGTATAGGGAAATGGACACGCTGTAACAATGACTTAAAATCTAAGTTTAATTTGGATATCCCTAGCAGCTTCCCATATCACGTAAATCTCAGCAGAAAAGGCTATCGTTCATTAATATACAGTGGGGACCATGACATGTTAGTTTCATTCTTAGCTACTCAAGCGTGGATAAGATCTTTGAACTATTCCATCGTGTCTGACTGGAGGCAGTGGTATTACAATGACCAAGTAGCAGGATATACCAGGACTTACTCGAATAAGATGACATTTGCAACTGTGAAGGGTGGAGGACATACAGCTCCCGAGTACAAACCTGAAGAATGTTTAGCCATGTTCAGTAGATGGTTATCTAATAGGCCACTGTAG 1155 0.4286 MASHNGLVVIVFVLLISSKLAATSHNIVRFLPGFQGPLPFLLETGYVEVGESEAEAEVFYYFIESENDPKEDPILLWLTGGPGCSAFSGLVSSIIFVDLPVGTGFSYPKTERAVHQGTTKLVRNAHQFLRKWLIDHPEFLSNEVYIAGDSYCGIPVPVIVQEILNGNEGGMQPSINIQGYLLGNPVTTATEKNYEIPFNHGMALISDELYEVSWRRSLAQKTSAFFRTPITLPPLYCRSHVYVLCTFWANDGNVRKALHIRKGSIGKWTRCNNDLKSKFNLDIPSSFPYHVNLSRKGYRSLIYSGDHDMLVSFLATQAWIRSLNYSIVSDWRQWYYNDQVAGYTRTYSNKMTFATVKGGGHTAPEYKPEECLAMFSRWLSNRPL 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1597 384 Gene3D alpha/beta hydrolase 21 92 IPR029058 -
Aed4g1597 384 Gene3D alpha/beta hydrolase 93 226 IPR029058 -
Aed4g1597 384 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 230 383 IPR001563 GO:0004185|GO:0006508
Aed4g1597 384 Pfam Serine carboxypeptidase 91 211 IPR001563 GO:0004185|GO:0006508
Aed4g1597 384 Pfam Serine carboxypeptidase 246 381 IPR001563 GO:0004185|GO:0006508
Aed4g1597 384 PRINTS Carboxypeptidase C serine protease (S10) family signature 351 364 IPR001563 GO:0004185|GO:0006508
Aed4g1597 384 PRINTS Carboxypeptidase C serine protease (S10) family signature 97 107 IPR001563 GO:0004185|GO:0006508
Aed4g1597 384 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 157 IPR001563 GO:0004185|GO:0006508
Aed4g1597 384 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 11 89 - -
Aed4g1597 384 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 230 383 - -
Aed4g1597 384 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 89 IPR001563 GO:0004185|GO:0006508
Aed4g1597 384 Gene3D alpha/beta hydrolase 227 384 IPR029058 -
Aed4g1597 384 SUPERFAMILY alpha/beta-Hydrolases 28 383 IPR029058 -
Aed4g1597 384 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 91 214 - -
Aed4g1597 384 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 91 214 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1597 Aed-Chr4 20732823 20737950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1597 22 57 Calmodulin-binding Proteins AT2G22960 58.333 1.02e-06 47.0