Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1587 ATGGCTCCTACTATTGAGCCTCCTCCAATCAATATTGAACCTGAGAATTGTCCTGAAGCGGTGATCCAATGGTTCAACCTAACATCACAGCAACAGTACAAGCGACAATGTGCATTAAGCAGAGACCTTTCGTTACAAGCGAAGAAGCATCTTCGTTTTCTGGGTTGGATGTTTTGGCACGCTGACAAGAAAGACAAATGGGAAATGCGTTACACCTCTCCCATCAGTGGCAAGAACTACATCTCTCTCAGAAGAGCATGCCAAGGTTGCATCCAAGAAGGAGGCTGCAACAATAATATCGGAAACCCAAACCCTCCTTCTGCGCCGCCAAAGGAGGAGATAAAGAGACCAAGGAAACCCACGAAAGAAATAACGAGGGCATGCAAGAAAAGACAAAGGGATGTGGGAGAAGCCTCTAGTTCTACGAATAATAATGGTAAAAGGGGAAGAAATGGTACTTTGCGTTCAATCAAAATAGCGAGGCGTGAAAGTGATGGTTCTGATCAGTCTTCTTCGCAACGCCATCGTGGAACAATTATCCCTTGGCTGATTGATAACAATGTGGTTGCTTTGTATTCCTTGGTATTATGCAGTGGTGCAAATAACGTGGTCAAGAAAGGGAAGCTATGCCGCAGTGGCATAGCTTGTGAGTGTTGTGGCGTCTTTTTCTCTCCCACTCGCTTTGAGGCTCATGCTGGCTGCCACAAGCACAGACCAAACGCTACAATTTTCTTGGAAGATGGAAGGTCATTGCTCGATTGCCAAAAGGAAGCCCTGAGTAGTTCACAGCAAAAAGTGCGTCCTTTGATGAAAGAAGAAGAAGAAACGACGACGGAGGATCCCCGTGAGTATCAAAATGATAGCATTTGTGCCGTTTGCTGCTATGGTGGTGAGCTAGTGTTGTGTGATCGATGCCCCTCTTCGTTTCATCTCAGTTGTTTAGGTTTAGAGCATGTTCCTGATGGTGATTGGTTCTGCCCAGCTTGCTGTTGCAAAGTATGCAAGCAAGCTCATTGTGATCATGATAATGTGGATGCTAATAGGGTTCTAGTTTGTCATCAATGTGAGGGAAGATGCCATACTGGGTGCTTAAAGTTAAAATCTTTAGCATATACCAAGATTGGAAAGGAAGAAGACCATGTTCAGAATGAGAATTGGTTCTGCAGTAGAGATTGTAAGAAGATATTTTTAAGTCTGCAGAAGCTGATGGGAGAACCGATTAGTGTTGGTGCAGATAATAATCTAACTTGGACGCTGTTGAAGGCTGTGAAAACTGATAGCAGCAGCAGTGGAGAATCTGATCTTACATGGGATCAAGTTGAAGGTTTGAGTCAAAATGAAAGCAAGCTTAGTGTGGCTCTTAATGTATTGCGTGAGTGTTTTGATCCGGTTATTGATTCTTTCTTCGGGAGAGACATGCTGGCTGATGTTGTTTTCAGCAGAGGTTCAGAACTCAATCGTTTGAACTTTAGTGGCTTCTACACTGTGGTTCTGGAGAGGGATGAGGAAGTGGTTTGTGTTGCCACCATAAGGGTTTTTGGGAAGAGGGTGGCCGAAATACCCTTTGTGGCTACCAGAGTGCTATGTAGAAAACAAGGATTGTGTAGCATCTTAATGAATGAGATTGAGAAGCAGTTGAATTACTTGGGAGTAGAGGAGATTGTTCTGCCTTCCTCGCCTAATGTGATTGACACTTGGACAAACTCATTCGACTTTGTAAAGATGACACGCTCAGATAAGTCTCAGTTTAGTCATCATGTTTTTCTTAACTTCGAGGATACCATCATGTGCCATAAGCCACTACTAGCCGGTGAAACTGACTCTTATTTTATCTAA 1836 0.4368 MAPTIEPPPINIEPENCPEAVIQWFNLTSQQQYKRQCALSRDLSLQAKKHLRFLGWMFWHADKKDKWEMRYTSPISGKNYISLRRACQGCIQEGGCNNNIGNPNPPSAPPKEEIKRPRKPTKEITRACKKRQRDVGEASSSTNNNGKRGRNGTLRSIKIARRESDGSDQSSSQRHRGTIIPWLIDNNVVALYSLVLCSGANNVVKKGKLCRSGIACECCGVFFSPTRFEAHAGCHKHRPNATIFLEDGRSLLDCQKEALSSSQQKVRPLMKEEEETTTEDPREYQNDSICAVCCYGGELVLCDRCPSSFHLSCLGLEHVPDGDWFCPACCCKVCKQAHCDHDNVDANRVLVCHQCEGRCHTGCLKLKSLAYTKIGKEEDHVQNENWFCSRDCKKIFLSLQKLMGEPISVGADNNLTWTLLKAVKTDSSSSGESDLTWDQVEGLSQNESKLSVALNVLRECFDPVIDSFFGRDMLADVVFSRGSELNRLNFSGFYTVVLERDEEVVCVATIRVFGKRVAEIPFVATRVLCRKQGLCSILMNEIEKQLNYLGVEEIVLPSSPNVIDTWTNSFDFVKMTRSDKSQFSHHVFLNFEDTIMCHKPLLAGETDSYFI 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1587 611 MobiDBLite consensus disorder prediction 111 136 - -
Aed4g1587 611 MobiDBLite consensus disorder prediction 137 151 - -
Aed4g1587 611 CDD NAT_SF 496 556 - -
Aed4g1587 611 Gene3D - 439 599 - -
Aed4g1587 611 ProSiteProfiles Zinc finger PHD-type profile. 287 332 IPR019787 -
Aed4g1587 611 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 271 346 IPR013083 -
Aed4g1587 611 MobiDBLite consensus disorder prediction 156 170 - -
Aed4g1587 611 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 440 594 IPR000182 GO:0016407
Aed4g1587 611 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 481 561 IPR016181 -
Aed4g1587 611 SMART PHD_3 331 393 IPR001965 -
Aed4g1587 611 SMART PHD_3 289 330 IPR001965 -
Aed4g1587 611 Pfam Acetyltransferase (GNAT) family 486 561 IPR000182 GO:0016407
Aed4g1587 611 Pfam Tify domain binding domain 207 258 IPR032308 -
Aed4g1587 611 PANTHER DUF724 DOMAIN-CONTAINING PROTEIN 4-RELATED 10 602 - -
Aed4g1587 611 SUPERFAMILY FYVE/PHD zinc finger 269 332 IPR011011 -
Aed4g1587 611 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 10 602 - -
Aed4g1587 611 MobiDBLite consensus disorder prediction 95 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1587 Aed-Chr4 20665541 20667376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1587 115 549 PHD Transcription Factor Family AT5G58610 40.807 1.52e-97 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1587 - - gmx:102668789 827.394