Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1586 ATGGAGGAACACGTGCATGACATGGGCGATGGGATGGGACCAACGGCGACAGCAACACCTATGACGACGACGCACATGACGTTTTTCTGGGGGAAGAATGCAGCGATTCTGTTTGAGGACTGGCCTGGGGACAGAAGTGGCATGTACGCGTTGGCATTGTTGTGTGTGTTGGGCATGTCCCTCATGGTGGAGTTTCTCTCCCACACTACTCGCTTCATCAAACCCACGTGGAGGAACCGTAGCGTGCTTGAAACCCTCATCCACCTCCTCAGGGTTGGCTTCTCTTACTTGCTCATGCTAGCGCTCATGTCCTTCAATGGAGGAGTGCTCTTAGTCGCTGTCTTTGGTCATACTCTCGGCTTTTTCTTTTTCAACAACAAACAACAACAACAACAACCTGATAAAGTGTCTGATCTTCCTCCACTCTCTTGTTAA 435 0.5034 MEEHVHDMGDGMGPTATATPMTTTHMTFFWGKNAAILFEDWPGDRSGMYALALLCVLGMSLMVEFLSHTTRFIKPTWRNRSVLETLIHLLRVGFSYLLMLALMSFNGGVLLVAVFGHTLGFFFFNNKQQQQQPDKVSDLPPLSC 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1586 144 PANTHER COPPER TRANSPORTER 1 18 142 - -
Aed4g1586 144 Pfam Ctr copper transporter family 76 124 IPR007274 GO:0005375|GO:0016021|GO:0035434
Aed4g1586 144 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 18 142 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1586 Aed-Chr4 20663351 20663785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1586 27 144 Inorganic Solute Cotransporters AT5G59030 42.742 4.73e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1586 K14686 - gmx:100306175 140.584