Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1583 ATGGAGAGTTACCTGAGTGAGGATTTTGGGGATGTGAAGGCAAAGAACTCGTCGGATGAAGCGCTTCAGAGATGGAGGAAGGCTTGTTGGCTTGTTAAGAATCACAAGAGGAGGTTTCGTTTCACTGCTAATCTCTCCAAGCGTTTCGAAGCTCAGGCTATCAGACGCTCCAATCAGGAGAAATTCAGAGTTGCTGTGTTGGTTTCACAAGCTGCTCTTCAGTTTATCCATGGTCTATTGCCAAGTGAGTACACTGTACCGGAAGAAGTTAAAACTGCTGGCTTTGATATTTGTGCTGATGAGCTGGGATCAATTGTTGAGGGACGTGATTTGAAGAAGTTGAAAAGTCATGGTGGAGTTGACGGTATCACAAACAAACTCAATACCTCAGTCGATGATGGGATATCAACATCTGAGCACTTGCTGAATCAGAGAACAGAAATTTATGGAGTTAATAAATTCGCTGAAAGTCCAGCCCGCGGATTTTGGGTTTTTGTATGGGAAGCCCTTCAAGATACAACCCTCATGATACTTGCTGTCTGTGCCTTGGTCTCTTTGGTGGTTGGTATAATAATGGAAGGGTGGCCCAAGGGTGCACAGGATGGAATTGGTATTGTTGCCAGCATATTGCTTGTGGTGTTTGTCACTGCCACAAGTGATTACAAGCAATCACTGCAGTTTAAGGATCTAGATAAAGAGAAGAAAAAAATTACAGTTCAGGTCACAAGAAATAGTTGTAGGCAGAAGCTTTCAATATATGATCTGCTTCCTGGTGATATTGTCCATCTAAATATTGGAGATCAGGTCCCTGCTGATGGCCTTTTTGTGTCTGGTTTCTCTGTGTTAATAAATGAATCAAGCTTGACAGGAGAAAGTGAACCGGTGAATGTCAGTGAACTTAATCCATTTCTCCTGTCTGGAACCAAAGTTCAAGATGGATCATGCAAGATGCTTGTGACTACTGTTGGAATGAGGACCCAGTGGGGTAAACTAATGGCTACTCTAAGTGAAGGGGGAGATGACGAAACACCTTTGCAGGTAAAGCTCAATGGTGTTGCTACCATCATTGGCAAAATTGGCCTCTTTTTCGCAGTTGTGACCTTTTCTGTGTTGGTCCAAGGACTATTTAGCCACAAGCTGCGAGAAGGATCCCAATGGACATGGTCTGGTGATGATGCAATACAAATTGTGGAATTCTTTGCTATTGCTGTCACTATTGTTGTTGTTGCTGTTCCTGAAGGTTTACCTTTAGCTGTAACATTAAGCCTTGCTTTTGCAATGAAAAAGATGATGAATGATAAGGCACTTGTTCGTCACTTGGCTGCTTGTGAGACAATGGGATCTGCCACTACTATCTGCAGTGACAAGACTGGCACATTAACTACTAACCACATGACTGTTGTAAAAGCTTACATATGTGGGAAGATTAAAGAAGTGAACAGCTCTAAGGTCTCTTCTGATTTCTCATCTGATATTCATGATTCTGCTCTAGCAATTCTACTTGAATCAATATTTAACAACACTGGAGGAGAAGTTGTCAAAAACAAAGATGCGAAGATCGAAATTCTAGGATCACCAACTGAGACTGCACTCTTGGAATTTGGGCTGTCACTTGGTGGTGATTTCCTAAAGGAACAACAAAGGTCAAAACTTGTGAAAGTTGAGCCATTTAATTCTATAAAGAAGTGCATGGGGGTGGTTCTCCAGCTTCCTAATGGTGGTTTCAGAGCACACTGCAAAGGTGCCTCTGAAATAATTCTAGCTTCATGTGACAAAGTTGTGGACTCAAGTGGCGAGGTTGTTCCCCTCAATGAAGACTCCATAAATCACTTGAATAATATGATTGAAACATTTGCTGGTGAAGCTCTCCGAACACTTTGCCTTGCTTACTTGGAAATTCATGATGAATTTTCTGTTAGAAATCCTATTCCTACTAGGGGTTACACTTGTATAGGAATTGTGGGTATTAAAGATCCAGTTCGCCCTGGTGTTCGAGAGTCTGTTGCCATTTGTAGGTCAGCTGGTATTGTTGTTAGGATGGTTACTGGAGACAACATAAATACAGCGAAGGCTATTGCTAGAGAATGTGGAATTTTAACAGATGGTATTGCAATTGAAGGCCCCGAGTTTCGTGAGAAGAGTAAGGAGGAATTGCTTGATATCATTCCAAAAATTCAGGTAGCAAAAGAAAGTGCCGATGTAATAATTCTAGATGATAACTTTTCTACCATTGTGACTGTAGCTAGATGGGGCCGCTCAGTCTACATAAACATTCAGAAATTTGTGCAGTTTCAGCTAACTGTAAATGTTGTTGCTTTGATCGTCAATTTCTCTTCTGCTTGTTTGACCGGAAATGCTCCCCTAACTGCGGTTCAACTTCTATGGGTCAACATGATTATGGACACTCTTGGAGCACTTGCACTAGCCACTGAACCTCCTAATGATGAATTGATGAAAAGACCACCTGTTGGTAGGAAAGGAAACTTTATCAGTAATGTGATGTGGAGGAATATCTTGGGGCAGTCTATATATCAATTTGTTGTAATATGGTTCCTCCAGACCAGAGGAAAAGTAGCGTTTCATCTTGATGGACCAGATTCTGATCTGGTATTGAATACACTTATTTTCAACTCGTTTGTGTTCTGTCAGGTTTTCAATGAGATTAGTTCGAGGGACATGGAGAGGATAAATGTTTTTGAAGGGATACTGAAGAATTATGTCTTTGTAGTCGTCCTCACTTGCACTGTCGTCTTCCAAATTATAATTGTTGAATTCTTGGGCACCTTTGCAAACACATCTCCACTTAGTTTGAAGCAGTGGTTTGCTAGCGTTCTCTTTGGAGTTTTTGGCATGCCAGTTGCAGCAGCTCTAAAGATGATCCCTGTGGGATCTGTCTAA 2898 0.4151 MESYLSEDFGDVKAKNSSDEALQRWRKACWLVKNHKRRFRFTANLSKRFEAQAIRRSNQEKFRVAVLVSQAALQFIHGLLPSEYTVPEEVKTAGFDICADELGSIVEGRDLKKLKSHGGVDGITNKLNTSVDDGISTSEHLLNQRTEIYGVNKFAESPARGFWVFVWEALQDTTLMILAVCALVSLVVGIIMEGWPKGAQDGIGIVASILLVVFVTATSDYKQSLQFKDLDKEKKKITVQVTRNSCRQKLSIYDLLPGDIVHLNIGDQVPADGLFVSGFSVLINESSLTGESEPVNVSELNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFSVLVQGLFSHKLREGSQWTWSGDDAIQIVEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKAYICGKIKEVNSSKVSSDFSSDIHDSALAILLESIFNNTGGEVVKNKDAKIEILGSPTETALLEFGLSLGGDFLKEQQRSKLVKVEPFNSIKKCMGVVLQLPNGGFRAHCKGASEIILASCDKVVDSSGEVVPLNEDSINHLNNMIETFAGEALRTLCLAYLEIHDEFSVRNPIPTRGYTCIGIVGIKDPVRPGVRESVAICRSAGIVVRMVTGDNINTAKAIARECGILTDGIAIEGPEFREKSKEELLDIIPKIQVAKESADVIILDDNFSTIVTVARWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRPPVGRKGNFISNVMWRNILGQSIYQFVVIWFLQTRGKVAFHLDGPDSDLVLNTLIFNSFVFCQVFNEISSRDMERINVFEGILKNYVFVVVLTCTVVFQIIIVEFLGTFANTSPLSLKQWFASVLFGVFGMPVAAALKMIPVGSV 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1583 965 PRINTS P-type cation-transporting ATPase superfamily signature 284 298 - -
Aed4g1583 965 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Aed4g1583 965 PRINTS P-type cation-transporting ATPase superfamily signature 652 663 - -
Aed4g1583 965 PRINTS P-type cation-transporting ATPase superfamily signature 674 684 - -
Aed4g1583 965 PANTHER CATION TRANSPORTING ATPASE 727 962 - -
Aed4g1583 965 Gene3D - 142 336 - -
Aed4g1583 965 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Aed4g1583 965 SUPERFAMILY HAD-like 441 745 IPR036412 -
Aed4g1583 965 Pfam E1-E2 ATPase 236 431 - -
Aed4g1583 965 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 49 IPR024750 GO:0005516
Aed4g1583 965 Gene3D - 17 77 - -
Aed4g1583 965 Gene3D - 726 963 - -
Aed4g1583 965 SMART Cation_ATPase_N_a_2 116 190 IPR004014 -
Aed4g1583 965 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 393 477 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed4g1583 965 PANTHER CALCIUM-TRANSPORTING ATPASE 3 727 - -
Aed4g1583 965 PANTHER CALCIUM-TRANSPORTING ATPASE 727 962 - -
Aed4g1583 965 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 664 IPR023299 GO:0000166
Aed4g1583 965 Gene3D - 450 725 IPR023214 -
Aed4g1583 965 Pfam Cation transporting ATPase, C-terminus 786 960 IPR006068 -
Aed4g1583 965 Pfam Cation transport ATPase (P-type) 514 593 - -
Aed4g1583 965 PANTHER CATION TRANSPORTING ATPASE 3 727 - -
Aed4g1583 965 SUPERFAMILY Calcium ATPase, transduction domain A 237 333 IPR008250 -
Aed4g1583 965 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 111 726 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Aed4g1583 965 Gene3D - 168 449 - -
Aed4g1583 965 Pfam Cation transporter/ATPase, N-terminus 117 185 IPR004014 -
Aed4g1583 965 Gene3D - 463 659 IPR023299 GO:0000166
Aed4g1583 965 PRINTS Sodium/potassium-transporting ATPase signature 577 595 - -
Aed4g1583 965 PRINTS Sodium/potassium-transporting ATPase signature 203 223 - -
Aed4g1583 965 PRINTS Sodium/potassium-transporting ATPase signature 446 467 - -
Aed4g1583 965 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 961 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1583 Aed-Chr4 20621155 20627332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1583 1 964 Primary Pumps ATPases AT1G27770 76.447 0.0 1559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1583 K01537 - gmx:100810758 1749.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1583 4 20621155 20627332 Aed4g1583 4 20621155 20627332 ECH