Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1558 ATGAAAACCCATGACATTAACTTTGCCACAAGGCCTCATATCCTAGCTATGGAAAAAGTATCTTACAATTCCACAAATATAGCTTTTGCTCCCTATGGCAATTATTGGAGGCAGCTAAGAAAAATTTGCACATTGGAGCTTTTAAGCCTAAAACGTGTCAACTCATACCAGCCAACAAGAGAAGATGAGATCTCCAATCTTGTCAAATGGATTGATTCACAGAACGGATCCCCCATCAACTTCACTCAAGCAGGCTACCTTTGGCAACAAATGCAAAGACCAAGGAGAATTCATATCAGTTTGTCCATTGGAGATTTGTTTCCTTCGGCCACTTGGCTTCAACCTCTCACTGGCTTGAGCTCTAAGCTTGAGAGGTTGCATCAAGAAGCTGACCAGATAATGGAAAACATCATCAATGAACATAAAGAGGCAAAGTCAAAAGCCAGAGATGACCAAAGTGAAGCTGAAGATTTTGTGGATGTTCTCATACAATATGAGGATGGAAGCAAGCAGGATTTTTCCATAACTAGAGAATACATGAAGGCCATAATTCTGCACATTTTTGGTGCTGGAGGTGAGACATCAGCAACAACCATAGATTGGGCGATGGCTGAAATGATGAAGAATCCAAGAGTAATGAAGAAAGCACAAGCTGAGGTGAGAGAAGTATTCAATATGAAAGGAAGGGTTGGTGAAAACTTCATCAATGAACTCAAATATTTGAAACTAGTTGTCAAAGAGACCTTGAGGTTACACCCGCCAACTCCTCTTTTGCTTCCAAGAGAATGTGTCAAACATATAAATGGTTATGACATACCAGCCAAAAGCAAGGTCGTGGTCAATGCTTGGGCAATTGGAAGAGGTCCGAACTATTGGACTGAAGCAGAGAGGTTTTATCCTGAGAGGTTCATCGATAGCACTGTTGATTACAAAGGGACTAATTTTGAGTACATTCCTTTTGGTGCTGGAAGAAGGATGTGCCCAGGCAGCACGTTTGCTTTGAGAGTTATTGAACTAGCCCTTGCAATGTTGCTGTATCACTTTGATTGGAAGCTTCCCAATGGAATGATAAGTGAAGAGTTGGACATGAGTGGTTTGGAGTCATCGTTAGCAGAAAAGATGATCTATTCTTGGTTCCTTTCCCTTATCATCCGCCGTCTTACATGGAATTCACAATGA 1179 0.4131 MKTHDINFATRPHILAMEKVSYNSTNIAFAPYGNYWRQLRKICTLELLSLKRVNSYQPTREDEISNLVKWIDSQNGSPINFTQAGYLWQQMQRPRRIHISLSIGDLFPSATWLQPLTGLSSKLERLHQEADQIMENIINEHKEAKSKARDDQSEAEDFVDVLIQYEDGSKQDFSITREYMKAIILHIFGAGGETSATTIDWAMAEMMKNPRVMKKAQAEVREVFNMKGRVGENFINELKYLKLVVKETLRLHPPTPLLLPRECVKHINGYDIPAKSKVVVNAWAIGRGPNYWTEAERFYPERFIDSTVDYKGTNFEYIPFGAGRRMCPGSTFALRVIELALAMLLYHFDWKLPNGMISEELDMSGLESSLAEKMIYSWFLSLIIRRLTWNSQ 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1558 392 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 96 364 - -
Aed4g1558 392 PANTHER CYTOCHROME P450 71B11-RELATED 96 364 - -
Aed4g1558 392 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 84 - -
Aed4g1558 392 PANTHER CYTOCHROME P450 71B11-RELATED 1 84 - -
Aed4g1558 392 Pfam Cytochrome P450 116 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1558 392 PRINTS E-class P450 group I signature 281 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1558 392 PRINTS E-class P450 group I signature 327 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1558 392 PRINTS E-class P450 group I signature 199 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1558 392 PRINTS E-class P450 group I signature 317 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1558 392 PRINTS E-class P450 group I signature 242 260 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1558 392 PRINTS E-class P450 group I signature 179 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1558 392 Coils Coil 116 154 - -
Aed4g1558 392 Gene3D Cytochrome P450 1 373 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1558 392 PRINTS P450 superfamily signature 190 207 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1558 392 PRINTS P450 superfamily signature 318 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1558 392 PRINTS P450 superfamily signature 327 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1558 392 PRINTS P450 superfamily signature 243 254 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1558 392 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 320 329 IPR017972 GO:0005506|GO:0016705
Aed4g1558 392 SUPERFAMILY Cytochrome P450 2 357 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1558 Aed-Chr4 20473340 20474675 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1558 1 363 Cytochrome P450 AT3G26210 41.919 1.85e-105 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1558 - - gmx:100778572 566.229