Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1556 ATGGCTCTACTATTCCTCTACGTTTTGGCTCTTATTTCCTTTGTCTTCACAACCCTTATAGTGCAAAAACTAAGAAAGAAACACAAGAAGATTGATGACACAACTTGTAACATGCCCCTTGGGCCTAGAAAGCTACCTATTATAGGAAATATATACAATCTGCTATGCTCTGAACCCCATAGAAAATTAAGAGACTTGGCCTTAAAATATGGACCCGTGATGCATCTTCAACTTGGAGAGGTTTCAACTATTGTTATTTCATCCCCTGAGTGTGCTAAGGAAGTGATGAAAACCCATGATATTAATTTTTCCACAAGGCCTCAAATCCTAGCAACTGAAATAATGTCTTATAATTCCACAAGTATAGCTTTTTCTCCTTATGGCAATTATTGGAGGCAGCTAAGAAAGATTTGCATATTGGAGCTTTTAAGCCTAAAACGTGTCAACTCATACCAGCCAGTTAGAGAAGAAGAGCTCTCCAATCTTGTCAAATGGATTGCTTTAGAGAAAGGATCCCCCATCAACCTCACTCAAGCAGTACTTTCATCTATTTATACAATTTCTTCGATGGCTACCTTTGGCAAGAAATGCAAAGACCAAGAAAAGTTTATATCAGTGCTAACAAAATCAATAAAAGTTGCAGGAGGTTTTAACATTGGTGATTTGTTTCCTTCTTCAACTTGGATTCAAAATCTCACTGGCTTGAGGCCTAAGCTTGAGAGTTTGCATCAACAAGCTGATCAGATATTGGAAAACATCATCAATGACCATAAAGAGGCAAAGTCAAAAGCCAAGGGTGACCAAAGTGAAGCACAAGATCTGGTTGATGTTCTCATAGAATATGAGGATGGTAGCAAGCAGGATTTATACTTAACTAAAAACAACATCAAGGCCATAGTTCAGGACATTTTCGGTGCTGGGGGTGAGACATCAGCTACAACCATAGATTGGACAATGGCTGAGATGATAAAGGATCCAAGAGTAATGAAGAAAGCACAAGCTGAGGTGAGAGAGGTATTCAATATGAAAGGTAGGGTTGATGAAAATTGCATCAATGAACTTCAATATTTGAAACTAATTGTGAAAGAGACCTTGAGGTTGCACCCTCCAGCTCCTCTTTTGCTTCCAAGAGAATGTGGTCAAACATGTGAGATACATGGTTATCACATACCAGCTAAAAGCAAGGTCATAGTCAATGCTTGGGCAATTGGAAGAGATCCAAACTATTGGACTGAAGCAGAGAGGTTTTATCCTGAGAGGTTCATTGATAGCACTATTGATTACAAAGGGAATAATTTTGAGTTCATCCCTTTTGGTGCTGGAAGAAGGATATGCCCAGGAATCACATTTGCTTTGAGAACTGTTGAACTAGCCCTTGCAATGTTGTTGTATCACTTTGATTGGAAGCTTCCAAATGGAATGACAAGTGGAGAACTGGACATGAGTGAGGAGTTTGGAGTCACAGTTAGAAGGAAAGATGATCTATTCTTGGTTCCTTTTCCATATCATCCTTTGCCTGTCACATGA 1527 0.391 MALLFLYVLALISFVFTTLIVQKLRKKHKKIDDTTCNMPLGPRKLPIIGNIYNLLCSEPHRKLRDLALKYGPVMHLQLGEVSTIVISSPECAKEVMKTHDINFSTRPQILATEIMSYNSTSIAFSPYGNYWRQLRKICILELLSLKRVNSYQPVREEELSNLVKWIALEKGSPINLTQAVLSSIYTISSMATFGKKCKDQEKFISVLTKSIKVAGGFNIGDLFPSSTWIQNLTGLRPKLESLHQQADQILENIINDHKEAKSKAKGDQSEAQDLVDVLIEYEDGSKQDLYLTKNNIKAIVQDIFGAGGETSATTIDWTMAEMIKDPRVMKKAQAEVREVFNMKGRVDENCINELQYLKLIVKETLRLHPPAPLLLPRECGQTCEIHGYHIPAKSKVIVNAWAIGRDPNYWTEAERFYPERFIDSTIDYKGNNFEFIPFGAGRRICPGITFALRTVELALAMLLYHFDWKLPNGMTSGELDMSEEFGVTVRRKDDLFLVPFPYHPLPVT 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1556 508 SUPERFAMILY Cytochrome P450 41 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1556 508 Gene3D Cytochrome P450 31 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1556 508 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1556 508 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1556 508 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1556 508 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1556 508 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1556 508 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1556 508 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1556 508 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1556 508 Pfam Cytochrome P450 39 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1556 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Aed4g1556 508 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 505 - -
Aed4g1556 508 PANTHER CYTOCHROME P450 71B11-RELATED 8 505 - -
Aed4g1556 508 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1556 508 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1556 508 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1556 508 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1556 Aed-Chr4 20469655 20471409 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1556 47 499 Cytochrome P450 AT3G26210 44.924 1.01e-135 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1556 - - gmx:100778040 931.784